RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CCDC173Q0VFZ6 552 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 RALGDSQ12967 914 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 PTPRRQ15256 657 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 HLA-BQ31612 363 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 UAP1L1Q3KQV9 507 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 DPPA4Q7L190 304 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 CDKL3Q8IVW4 592 aaPredicted RBP14.02□□□□□ -0.16
USP46-209ENST00000514536 ZNF567Q8N184 647 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 MINDY1Q8N5J2 469 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 TMEM145Q8NBT3 493 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 SPATA22Q8NHS9 363 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 ASB12Q8WXK4 309 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 KLHDC7BQ96G42 594 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 LENG8Q96PV6 779 aaPredicted RBP14.02□□□□□ -0.16
USP46-209ENST00000514536 KLF6Q99612 283 aaPredicted RBP14.02□□□□□ -0.16
USP46-209ENST00000514536 TDRD1Q9BXT4 1180 aaKnown RBP14.02□□□□□ -0.16
USP46-209ENST00000514536 PCDH9Q9HC56 1237 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 KLHL8Q9P2G9 620 aaPredicted RBP14.02□□□□□ -0.16
USP46-209ENST00000514536 B4GALT6Q9UBX8 382 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 CDV3Q9UKY7 258 aaKnown RBP14.02□□□□□ -0.16
USP46-209ENST00000514536 R3HDM2Q9Y2K5 976 aaKnown RBP14.02□□□□□ -0.16
USP46-209ENST00000514536 HS3ST3A1Q9Y663 406 aa14.02□□□□□ -0.16
USP46-209ENST00000514536 GOLGA8CPA6NN73 597 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 LZTS3O60299 673 aaPredicted RBP14.01□□□□□ -0.17
USP46-209ENST00000514536 C6P13671 934 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 CA4P22748 312 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 CTSKP43235 329 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 LIMK1P53667 647 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 ZNF569Q5MCW4 686 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 PRAMEF14Q5SWL7 426 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 IL27RAQ6UWB1 636 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 LIPIQ6XZB0 460 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 GCNT7Q6ZNI0 430 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 KDELC2Q7Z4H8 507 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 SLC13A5Q86YT5 568 aaPredicted RBP14.01□□□□□ -0.17
USP46-209ENST00000514536 NDUFAF2Q8N183 169 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 LPCAT1Q8NF37 534 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 CENPTQ96BT3 561 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 SCRN2Q96FV2 425 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 BMFQ96LC9 184 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 SMIM14Q96QK8 99 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 VAT1Q99536 393 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 CARD9Q9H257 536 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 GAREM1Q9H706 876 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 IL21RQ9HBE5 538 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 UBP1Q9NZI7 540 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 TRHDEQ9UKU6 1024 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 PYCARDQ9ULZ3 195 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 PPIL1Q9Y3C6 166 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 CEP250Q9BV73 2442 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 PI4KAP42356 2102 aa14.01□□□□□ -0.17
USP46-209ENST00000514536 A0A0U1RQS6 177 aa14□□□□□ -0.17
USP46-209ENST00000514536 POM121BA6NF01 834 aa14□□□□□ -0.17
USP46-209ENST00000514536 NPIPB15A6NHN6 443 aaPredicted RBP14□□□□□ -0.17
USP46-209ENST00000514536 F5H423 210 aaPredicted RBP14□□□□□ -0.17
USP46-209ENST00000514536 ENC1O14682 589 aa14□□□□□ -0.17
USP46-209ENST00000514536 FPGTO14772 594 aa14□□□□□ -0.17
USP46-209ENST00000514536 KCNN4O15554 427 aa14□□□□□ -0.17
USP46-209ENST00000514536 OPHN1O60890 802 aa14□□□□□ -0.17
USP46-209ENST00000514536 MT-CYBP00156 380 aaPredicted RBP14□□□□□ -0.17
USP46-209ENST00000514536 ALPIP09923 528 aa14□□□□□ -0.17
USP46-209ENST00000514536 ELFN1P0C7U0 828 aa14□□□□□ -0.17
USP46-209ENST00000514536 CYP2A6P11509 494 aaPredicted RBP14□□□□□ -0.17
USP46-209ENST00000514536 NFKB1P19838 968 aa14□□□□□ -0.17
USP46-209ENST00000514536 NFKBIAP25963 317 aa14□□□□□ -0.17
USP46-209ENST00000514536 VIPR1P32241 457 aa14□□□□□ -0.17
USP46-209ENST00000514536 HNF1BP35680 557 aa14□□□□□ -0.17
USP46-209ENST00000514536 PUM1Q14671 1186 aaKnown RBP eCLIP14□□□□□ -0.17
USP46-209ENST00000514536 PCSK7Q16549 785 aa14□□□□□ -0.17
USP46-209ENST00000514536 USP45Q70EL2 814 aa14□□□□□ -0.17
USP46-209ENST00000514536 DGLUCYQ7Z3D6 616 aa14□□□□□ -0.17
USP46-209ENST00000514536 IQCHQ86VS3 1027 aa14□□□□□ -0.17
USP46-209ENST00000514536 TADA1Q96BN2 335 aa14□□□□□ -0.17
USP46-209ENST00000514536 FERMT1Q9BQL6 677 aa14□□□□□ -0.17
USP46-209ENST00000514536 USP29Q9HBJ7 922 aa14□□□□□ -0.17
USP46-209ENST00000514536 MBNL1Q9NR56 388 aaKnown RBP14□□□□□ -0.17
USP46-209ENST00000514536 MED19A0JLT2 244 aaPredicted RBP14□□□□□ -0.17
USP46-209ENST00000514536 CFAP69A5D8W1 941 aa14□□□□□ -0.17
USP46-209ENST00000514536 USP27XA6NNY8 438 aa14□□□□□ -0.17
USP46-209ENST00000514536 SLC30A4O14863 429 aa14□□□□□ -0.17
USP46-209ENST00000514536 PMPCBO75439 489 aa14□□□□□ -0.17
USP46-209ENST00000514536 RECQL5O94762 991 aaPredicted RBP14□□□□□ -0.17
USP46-209ENST00000514536 THEGLP0DJG4 465 aa14□□□□□ -0.17
USP46-209ENST00000514536 SDHBP21912 280 aa14□□□□□ -0.17
USP46-209ENST00000514536 CXCR5P32302 372 aa14□□□□□ -0.17
USP46-209ENST00000514536 NXPH1P58417 271 aa14□□□□□ -0.17
USP46-209ENST00000514536 RPL26P61254 145 aaKnown RBP14□□□□□ -0.17
USP46-209ENST00000514536 OVGP1Q12889 678 aa14□□□□□ -0.17
USP46-209ENST00000514536 WSCD2Q2TBF2 565 aa14□□□□□ -0.17
USP46-209ENST00000514536 DENND2CQ68D51 928 aa14□□□□□ -0.17
USP46-209ENST00000514536 KDM7AQ6ZMT4 941 aa14□□□□□ -0.17
USP46-209ENST00000514536 Q6ZSR6 202 aa14□□□□□ -0.17
USP46-209ENST00000514536 ABI3BPQ7Z7G0 1075 aa14□□□□□ -0.17
USP46-209ENST00000514536 TSPAN33Q86UF1 283 aa14□□□□□ -0.17
USP46-209ENST00000514536 SPATS2Q86XZ4 545 aaKnown RBP14□□□□□ -0.17
USP46-209ENST00000514536 TP53I13Q8NBR0 393 aaPredicted RBP14□□□□□ -0.17
USP46-209ENST00000514536 OR13H1Q8NG92 308 aa14□□□□□ -0.17
USP46-209ENST00000514536 FCRL5Q96RD9 977 aa14□□□□□ -0.17
USP46-209ENST00000514536 MCCC1Q96RQ3 725 aaPredicted RBP14□□□□□ -0.17
USP46-209ENST00000514536 C1QTNF7Q9BXJ2 289 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms