RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TMEM9Q9P0T7 183 aa10.56□□□□□ -0.72
CLDND1-227ENST00000513452 MOSPD1Q9UJG1 213 aa10.56□□□□□ -0.72
CLDND1-227ENST00000513452 STAP1Q9ULZ2 295 aa10.56□□□□□ -0.72
CLDND1-227ENST00000513452 KCNMB2Q9Y691 235 aa10.56□□□□□ -0.72
CLDND1-227ENST00000513452 FBN2P35556 2912 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 B4E171 279 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 ZW10O43264 779 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 TMCC1O94876 653 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 ETFBP38117 255 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 TSPAN7P41732 249 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 KIAA1024LP59773 190 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 MC1RQ01726 317 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 SLC6A3Q01959 620 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 LRRC63Q05C16 580 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 ELP6Q0PNE2 266 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 NR1D2Q14995 579 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 MAMDC2Q7Z304 686 aaPredicted RBP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 TICAM1Q8IUC6 712 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 FAM114A1Q8IWE2 563 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 CCDC13Q8IYE1 715 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 NETO2Q8NC67 525 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 EHBP1Q8NDI1 1231 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 CPT1CQ8TCG5 803 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 ZDHHC1Q8WTX9 485 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 FUBP1Q96AE4 644 aaKnown RBP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 RTP4Q96DX8 246 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 HMCESQ96FZ2 354 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 TEFMQ96QE5 360 aaKnown RBP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 CTRCQ99895 268 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 UBE2TQ9NPD8 197 aaPredicted RBP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 PCDH12Q9NPG4 1184 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 CASS4Q9NQ75 786 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 SPATS2LQ9NUQ6 558 aaKnown RBP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 CUEDC1Q9NWM3 386 aaPredicted RBP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 RRN3Q9NYV6 651 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 DKK3Q9UBP4 350 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 HPCAL4Q9UM19 191 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 KCTD3Q9Y597 815 aa10.55□□□□□ -0.72
CLDND1-227ENST00000513452 MRPS18BQ9Y676 258 aaKnown RBP10.55□□□□□ -0.72
CLDND1-227ENST00000513452 ANKRD36A6QL64 1941 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 CXorf51AA0A1B0GTR3 108 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 P4HA2O15460 535 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 PIGNO95427 931 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 ECEL1O95672 775 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 IGSF6O95976 241 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 F9P00740 461 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 KELP23276 732 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 ELAVL4P26378 380 aaKnown RBP10.54□□□□□ -0.72
CLDND1-227ENST00000513452 USP8P40818 1118 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 PPM1FP49593 454 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-227ENST00000513452 LIG3P49916 1009 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 RHOAP61586 193 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 RAD51Q06609 339 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 ABHD18Q0P651 414 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 PTPN20Q4JDL3 420 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 ACBD5Q5T8D3 534 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-227ENST00000513452 TIPARPQ7Z3E1 657 aaKnown RBP10.54□□□□□ -0.72
CLDND1-227ENST00000513452 C17orf82Q86X59 251 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-227ENST00000513452 FAM131BQ86XD5 332 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 SRRM1Q8IYB3 904 aaKnown RBP10.54□□□□□ -0.72
CLDND1-227ENST00000513452 BMPERQ8N8U9 685 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-227ENST00000513452 PATE1Q8WXA2 126 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 PGAP3Q96FM1 320 aaPredicted RBP10.54□□□□□ -0.72
CLDND1-227ENST00000513452 NCAPGQ9BPX3 1015 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 TTYH3Q9C0H2 523 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 DNAI1Q9UI46 699 aa10.54□□□□□ -0.72
CLDND1-227ENST00000513452 IGHV1OR21-1A0A087WYE8 117 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 FAM170AA1A519 330 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 PRSS38A1L453 326 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 TNFRSF10CO14798 259 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 INSIG1O15503 277 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 BUB1O43683 1085 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 RFPL1O75677 317 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 STK17BO94768 372 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 CLDN1O95832 211 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 DDAH2O95865 285 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 PDGFAP04085 211 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 FGF1P05230 155 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 CCNB1P14635 433 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 MMP12P39900 470 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 GPR3P46089 330 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 SUOXP51687 545 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 ILF3Q12906 894 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLDND1-227ENST00000513452 PNOCQ13519 176 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 AGERQ15109 404 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
CLDND1-227ENST00000513452 SLC25A52Q3SY17 297 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
CLDND1-227ENST00000513452 SNAP47Q5SQN1 464 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 RWDD4Q6NW29 188 aaKnown RBP10.53□□□□□ -0.72
CLDND1-227ENST00000513452 ERAP2Q6P179 960 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 SLC30A9Q6PML9 568 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 ZNF354CQ86Y25 554 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 NRROSQ86YC3 692 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 NT5C3BQ969T7 300 aa10.53□□□□□ -0.72
CLDND1-227ENST00000513452 EXOC2Q96KP1 924 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms