RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ELAVL4P26378 380 aaKnown RBP11.26□□□□□ -0.61
RNF4-218ENST00000513284 MAP4P27816 1152 aaKnown RBP11.26□□□□□ -0.61
RNF4-218ENST00000513284 HTR1BP28222 390 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 CSF2RBP32927 897 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 TSPAN7P41732 249 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 BECN1Q14457 450 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 AGERQ15109 404 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 CLPPQ16740 277 aaPredicted RBP11.26□□□□□ -0.61
RNF4-218ENST00000513284 CRTC2Q53ET0 693 aaPredicted RBP11.26□□□□□ -0.61
RNF4-218ENST00000513284 BRMS1LQ5PSV4 323 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 C1QL3Q5VWW1 255 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 C16orf46Q6P387 395 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 LRRC31Q6UY01 552 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 ASB18Q6ZVZ8 466 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 DRC7Q8IY82 874 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 NLGN4XQ8N0W4 816 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 PELI3Q8N2H9 469 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 AGBL5Q8NDL9 886 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 NLGN4YQ8NFZ3 816 aaPredicted RBP11.26□□□□□ -0.61
RNF4-218ENST00000513284 OR4D9Q8NGE8 314 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 PATE1Q8WXA2 126 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 RTP4Q96DX8 246 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 DHTKD1Q96HY7 919 aaPredicted RBP11.26□□□□□ -0.61
RNF4-218ENST00000513284 TIGD1Q96MW7 591 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 LGR4Q9BXB1 951 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 OSBPL1AQ9BXW6 950 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 MAGEB5Q9BZ81 275 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 ASPSCR1Q9BZE9 553 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 GDPD2Q9HCC8 539 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 PDP2Q9P2J9 529 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 DKK3Q9UBP4 350 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 PDZD2O15018 2839 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 TRIM49BA6NDI0 452 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 EFCAB7A8K855 629 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 BECN2A8MW95 431 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 DAB1O75553 588 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 ECEL1O95672 775 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 GNA14O95837 355 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 THRAP10827 490 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 KRT5P13647 590 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 SNRPD1P62314 119 aaKnown RBP11.25□□□□□ -0.61
RNF4-218ENST00000513284 SLC6A3Q01959 620 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 TRA2AQ13595 282 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNF4-218ENST00000513284 EIF2S3LQ2VIR3 472 aaKnown RBP11.25□□□□□ -0.61
RNF4-218ENST00000513284 DCAF12Q5T6F0 453 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 C11orf57Q6ZUT1 292 aaPredicted RBP11.25□□□□□ -0.61
RNF4-218ENST00000513284 SLC26A9Q7LBE3 791 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 MAMDC2Q7Z304 686 aaPredicted RBP11.25□□□□□ -0.61
RNF4-218ENST00000513284 HEATR4Q86WZ0 1026 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 FAM114A1Q8IWE2 563 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 CCDC13Q8IYE1 715 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 FMR1NBQ8N0W7 255 aaPredicted RBP11.25□□□□□ -0.61
RNF4-218ENST00000513284 OR56A4Q8NGH8 313 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 CPT1CQ8TCG5 803 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 STARD8Q92502 1023 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 PGAP3Q96FM1 320 aaPredicted RBP11.25□□□□□ -0.61
RNF4-218ENST00000513284 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 CTRCQ99895 268 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 APMAPQ9HDC9 416 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 TLK1Q9UKI8 766 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 MFHAS1Q9Y4C4 1052 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 MAP4K5Q9Y4K4 846 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 APCP25054 2843 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 HIVEP3Q5T1R4 2406 aa11.25□□□□□ -0.61
RNF4-218ENST00000513284 ADGRG4Q8IZF6 3080 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 CELSR1Q9NYQ6 3014 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 IGHV1OR21-1A0A087WYE8 117 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 CXorf51AA0A1B0GTR3 108 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TTLL8A6PVC2 850 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 THAP12O43422 761 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 MED7O43513 233 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 FGFR1OPO95684 399 aaKnown RBP11.24□□□□□ -0.61
RNF4-218ENST00000513284 DDAH2O95865 285 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 PCCBP05166 539 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 GM2AP17900 193 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TCN2P20062 427 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 CSTF2P33240 577 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNF4-218ENST00000513284 TRIM23P36406 574 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 LIG3P49916 1009 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 MC2RQ01718 297 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 ABHD18Q0P651 414 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 SEPT6Q14141 434 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TRNP1Q6NT89 227 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 BNIPLQ7Z465 357 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TMEM135Q86UB9 458 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 ZSWIM9Q86XI8 627 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
RNF4-218ENST00000513284 PTCD2Q8WV60 388 aaKnown RBP11.24□□□□□ -0.61
RNF4-218ENST00000513284 HMCESQ96FZ2 354 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TCTN2Q96GX1 697 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 FAM81BQ96LP2 452 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TBCBQ99426 244 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 ZYG11BQ9C0D3 744 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TTYH3Q9C0H2 523 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 CYP4F12Q9HCS2 524 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 PCDH12Q9NPG4 1184 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 CASS4Q9NQ75 786 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TMEM184BQ9Y519 407 aaPredicted RBP11.24□□□□□ -0.61
RNF4-218ENST00000513284 ANKRD36A6QL64 1941 aa11.24□□□□□ -0.61
RNF4-218ENST00000513284 TNRC6AQ8NDV7 1962 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms