RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TEX47Q8TBZ9 253 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 CDH19Q9H159 772 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 RANBP17Q9H2T7 1088 aaKnown RBP8.97□□□□□ -0.97
VCAN-208ENST00000512590 ACSS2Q9NR19 701 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 ZBTB40Q9NUA8 1239 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 GPATCH2LQ9NWQ4 482 aa8.97□□□□□ -0.97
VCAN-208ENST00000512590 C1orf232A0A0U1RR37 186 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 KCNH1O95259 989 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 ZNF35P13682 527 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 DNAJA1P31689 397 aaKnown RBP8.96□□□□□ -0.97
VCAN-208ENST00000512590 OR1D2P34982 312 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 NOXRED1Q6NXP6 359 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 C3orf33Q6P1S2 294 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 C12orf40Q86WS4 652 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 ZNF677Q86XU0 584 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 COQ8AQ8NI60 647 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 NMRAL1Q9HBL8 299 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 IFT46Q9NQC8 304 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 BTBD7Q9P203 1132 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 SERTAD3Q9UJW9 196 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 NUDT5Q9UKK9 219 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 TMCO1Q9UM00 188 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 TBX20Q9UMR3 447 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 VPS4AQ9UN37 437 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 MRPS7Q9Y2R9 242 aaKnown RBP8.96□□□□□ -0.97
VCAN-208ENST00000512590 MED31Q9Y3C7 131 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 ARL5AQ9Y689 179 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 FOXP2O15409 715 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 ZNF20P17024 532 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 LBX1P52954 281 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 RPL6Q02878 288 aaKnown RBP8.96□□□□□ -0.97
VCAN-208ENST00000512590 LRRC14Q15048 493 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 ENPP7Q6UWV6 458 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 PIGWQ7Z7B1 504 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 DHRSXQ8N5I4 330 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 THOC2Q8NI27 1593 aaKnown RBP8.96□□□□□ -0.97
VCAN-208ENST00000512590 SGSM3Q96HU1 749 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 NSMCE3Q96MG7 304 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 TBL1YQ9BQ87 522 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 UGGT1Q9NYU2 1555 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 ARMCX1Q9P291 453 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 PCDHB2Q9Y5E7 798 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 SPIN1Q9Y657 262 aaPredicted RBP8.96□□□□□ -0.97
VCAN-208ENST00000512590 SHANK2Q9UPX8 1470 aa8.96□□□□□ -0.97
VCAN-208ENST00000512590 A0A1W2PRG6 482 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 C2orf71A6NGG8 1288 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 SDR42E2A6NKP2 422 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 ASNA1O43681 348 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 CSDE1O75534 798 aaKnown RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 CD52P31358 61 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 STARP49675 285 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 ERFP50548 548 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 AFF1P51825 1210 aaKnown RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 CYP4F2P78329 520 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 RDH11Q8TC12 318 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 KLK6Q92876 244 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 TSC22D3Q99576 134 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 HES7Q9BYE0 225 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 TBL1XR1Q9BZK7 514 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 NOD2Q9HC29 1040 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 TLR7Q9NYK1 1049 aaKnown RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 EIF3KQ9UBQ5 218 aaKnown RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 DMGDHQ9UI17 866 aaKnown RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 CRB1P82279 1406 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 hCG_2014768A0A024R1R8 64 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 EFCAB10A6NFE3 127 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 H0YJX3 145 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 B3GALT2O43825 422 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 PLEKP08567 350 aaPredicted RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 LIFRP42702 1097 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 ENTPD1P49961 510 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 CDKL1Q00532 357 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 TBX2Q13207 712 aaPredicted RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 CHI3L2Q15782 390 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 TRAPPC6BQ86SZ2 158 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 CCNJLQ8IV13 435 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 GFM1Q96RP9 751 aaKnown RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 P2RX7Q99572 595 aaKnown RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 BCAS3Q9H6U6 928 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 PCDH12Q9NPG4 1184 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 BRD7Q9NPI1 651 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 TBC1D23Q9NUY8 699 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 SNX7Q9UNH6 387 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 A0A1B0GTH6 734 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 A6NLC8 198 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 ARHGEF33A8MVX0 844 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 HSPA12AO43301 675 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 PDE9AO76083 593 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 ADNP2Q6IQ32 1131 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 ACTRT2Q8TDY3 377 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 TRAPPC9Q96Q05 1148 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 ZNF607Q96SK3 696 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 BPIFA1Q9NP55 256 aa8.96□□□□□ -0.98
VCAN-208ENST00000512590 USP15Q9Y4E8 981 aaPredicted RBP8.96□□□□□ -0.98
VCAN-208ENST00000512590 A0A1W2PQ27 194 aa8.95□□□□□ -0.98
VCAN-208ENST00000512590 A0A1W2PQ64 194 aa8.95□□□□□ -0.98
VCAN-208ENST00000512590 A0A1W2PQD8 194 aa8.95□□□□□ -0.98
VCAN-208ENST00000512590 SERPINB7O75635 380 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms