RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 GOLPH3LQ9H4A5 285 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 CYP4F12Q9HCS2 524 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 MRPL40Q9NQ50 206 aaKnown RBP12.64□□□□□ -0.39
DDX41-215ENST00000512431 OR12D3Q9UGF7 316 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 HOOK1Q9UJC3 728 aaKnown RBP12.64□□□□□ -0.39
DDX41-215ENST00000512431 MFHAS1Q9Y4C4 1052 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 DAAM1Q9Y4D1 1078 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 LRRK2Q5S007 2527 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 BECN2A8MW95 431 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 B4E171 279 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 MKRN2OSH3BPM6 223 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 KDELR3O43731 214 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 RAMP2O60895 175 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 TMCC1O94876 653 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 RHOQP17081 205 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 TCN2P20062 427 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 CD1CP29017 333 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 TSPAN7P41732 249 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 STAT1P42224 750 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 MAZP56270 477 aaKnown RBP12.63□□□□□ -0.39
DDX41-215ENST00000512431 PEX6Q13608 980 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 GRM3Q14832 879 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 UGP2Q16851 508 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 ZNF438Q7Z4V0 828 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 FAM131BQ86XD5 332 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 TRIM59Q8IWR1 403 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 SSC4DQ8WTU2 575 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 PMEPA1Q969W9 287 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 FUBP1Q96AE4 644 aaKnown RBP12.63□□□□□ -0.39
DDX41-215ENST00000512431 C18orf8Q96DM3 657 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 GSDMCQ9BYG8 508 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 FGF22Q9HCT0 170 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 PCDH12Q9NPG4 1184 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 PRDM8Q9NQV8 689 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 PILRAQ9UKJ1 303 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 TP53TG5Q9Y2B4 290 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 KCTD3Q9Y597 815 aa12.63□□□□□ -0.39
DDX41-215ENST00000512431 LRRK1Q38SD2 2015 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 UNC13CQ8NB66 2214 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 MYO9AB2RTY4 2548 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 USP9XQ93008 2570 aaPredicted RBP12.62□□□□□ -0.39
DDX41-215ENST00000512431 BICDL2A1A5D9 508 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 DUX1O43812 170 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 HOXC4P09017 264 aaPredicted RBP12.62□□□□□ -0.39
DDX41-215ENST00000512431 CCNB1P14635 433 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 SCNN1AP37088 669 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 ABHD18Q0P651 414 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 ILF3Q12906 894 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDX41-215ENST00000512431 NR1D2Q14995 579 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 INO80DQ53TQ3 878 aaPredicted RBP12.62□□□□□ -0.39
DDX41-215ENST00000512431 ANKS6Q68DC2 871 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 KCTD16Q68DU8 428 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 KLHL10Q6JEL2 608 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 C16orf46Q6P387 395 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 GJB7Q6PEY0 223 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 HSCBQ8IWL3 235 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 PAF1Q8N7H5 531 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 PLA2G15Q8NCC3 412 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 TMEM35BQ8NCS4 154 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 CCL4L1Q8NHW4 92 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 VOPP1Q96AW1 172 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 ZPBPQ9BS86 351 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 TRIT1Q9H3H1 467 aaKnown RBP12.62□□□□□ -0.39
DDX41-215ENST00000512431 SUV39H2Q9H5I1 410 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 SPATS2LQ9NUQ6 558 aaKnown RBP12.62□□□□□ -0.39
DDX41-215ENST00000512431 NDFIP2Q9NV92 336 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 TMEM248Q9NWD8 314 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 OCIAD1Q9NX40 245 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 PCDHB3Q9Y5E6 796 aa12.62□□□□□ -0.39
DDX41-215ENST00000512431 UTP20O75691 2785 aaKnown RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 USP9YO00507 2555 aaPredicted RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 LOC101059948A0A1B0GTJ6 334 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 PRSS38A1L453 326 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 CFAP69A5D8W1 941 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 ECEL1O95672 775 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 FGF1P05230 155 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 MPSTP25325 297 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 OAS2P29728 719 aaKnown RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 RAPGEF1Q13905 1077 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 CRTC2Q53ET0 693 aaPredicted RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 ARTNQ5T4W7 220 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 NKAIN2Q5VXU1 208 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 TCTN3Q6NUS6 607 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 TRIM65Q6PJ69 517 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 BRAT1Q6PJG6 821 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 CEACAM20Q6UY09 585 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 ASB18Q6ZVZ8 466 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 NLRP14Q86W24 1093 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 C17orf82Q86X59 251 aaPredicted RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 DNAAF5Q86Y56 855 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 CCDC13Q8IYE1 715 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 UNC5BQ8IZJ1 945 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 GALNT11Q8NCW6 608 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 MSANTD4Q8NCY6 345 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 STARD8Q92502 1023 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 SNX21Q969T3 373 aa12.61□□□□□ -0.39
DDX41-215ENST00000512431 AHCYL2Q96HN2 611 aaKnown RBP12.61□□□□□ -0.39
DDX41-215ENST00000512431 CFAP57Q96MR6 1250 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms