RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 AIFM2Q9BRQ8 373 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PITHD1Q9GZP4 211 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 ABHD16BQ9H3Z7 469 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 RIBC2Q9H4K1 309 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 NOD2Q9HC29 1040 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 PFDN4Q9NQP4 134 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMEM184CQ9NVA4 438 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 ARHGEF38Q9NXL2 777 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 VPS54Q9P1Q0 977 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 MYO1AQ9UBC5 1043 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 HESX1Q9UBX0 185 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 MRPS2Q9Y399 296 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 RWDD3Q9Y3V2 267 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 DMRT1Q9Y5R6 373 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 GPC6Q9Y625 555 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 CNTNAP5Q8WYK1 1306 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 SMCHD1A6NHR9 2005 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 DOCK3Q8IZD9 2030 aa5.08□□□□□ -1.6
TRAPPC11-208ENST00000511955 LAMA3Q16787 3333 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 POTEB3A0JP26 581 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 AHRRA9YTQ3 701 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PEX1O43933 1283 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GLI1P08151 1106 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 NFKBIAP25963 317 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ITGB8P26012 769 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC7A1P30825 629 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PAFAH1B1P43034 410 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GNAQP50148 359 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ATP12AP54707 1039 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SOX10P56693 466 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ROR2Q01974 943 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GFPT1Q06210 699 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SCN1BQ07699 218 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GRB14Q14449 540 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CEBPEQ15744 281 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GRIK4Q16099 956 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 LEXMQ3ZCV2 418 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMEM177Q53S58 311 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 BEND6Q5SZJ8 279 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ATAD3BQ5T9A4 648 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PRAMEF20Q5VT98 475 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 TIGD7Q6NT04 549 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 POTEBQ6S5H4 581 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 METAP1DQ6UB28 335 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 KCNT2Q6UVM3 1135 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 MIER3Q7Z3K6 550 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 LRRC6Q86X45 466 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 MAP7D3Q8IWC1 876 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 IL31RAQ8NI17 732 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ENKURQ8TC29 256 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PHOSPHO2Q8TCD6 241 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 DNAJA4Q8WW22 397 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CLEC4DQ8WXI8 215 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 KAT2AQ92830 837 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GAL3ST3Q96A11 431 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 LENG1Q96BZ8 264 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 RPGRIP1Q96KN7 1286 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PPP1R36Q96LQ0 422 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PTCHD1Q96NR3 888 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 OR1F2PQ96R84 312 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CYTH2Q99418 400 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 RBM4BQ9BQ04 359 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 NAA11Q9BSU3 229 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 RBM4Q9BWF3 364 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 FAM192AQ9GZU8 254 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMEM117Q9H0C3 514 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC26A1Q9H2B4 701 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 RIOX1Q9H6W3 641 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 LTB4R2Q9NPC1 389 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PCDHB16Q9NRJ7 776 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ANKMY1Q9P2S6 941 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ARMCX3Q9UH62 379 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PCDHA10Q9Y5I2 948 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 TMEM120BA0PK00 339 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC15A5A6NIM6 579 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 FIGNL2A6NMB9 653 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GCOM1H8Y6P7 765 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 NKRFO15226 690 aaKnown RBP eCLIP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GUCY1B2O75343 617 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CDC123O75794 336 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 MFN2O95140 757 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PCDH8O95206 1070 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 MPOP05164 745 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ACAA1P09110 424 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CPN2P22792 545 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 ALDH3A1P30838 453 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PSMB10P40306 273 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCR10P46092 362 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GABRB2P47870 512 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SLC11A1P49279 550 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 HSD17B4P51659 736 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 OAZ1P54368 228 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 OXCT1P55809 520 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 EEF1A1P68104 462 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 PHEXP78562 749 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 GAD2Q05329 585 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 EEF1A2Q05639 463 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 SPIRE1Q08AE8 756 aa5.07□□□□□ -1.6
TRAPPC11-208ENST00000511955 CCINQ13939 588 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms