RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 BCL7CQ8WUZ0 217 aaPredicted RBP16.65■□□□□ 0.26
CLMAT3-201ENST00000510576 PEX13Q92968 403 aa16.65■□□□□ 0.26
CLMAT3-201ENST00000510576 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
CLMAT3-201ENST00000510576 SEZ6LQ9BYH1 1024 aa16.65■□□□□ 0.26
CLMAT3-201ENST00000510576 RETREG1Q9H6L5 497 aa16.65■□□□□ 0.26
CLMAT3-201ENST00000510576 NDE1Q9NXR1 346 aa16.65■□□□□ 0.26
CLMAT3-201ENST00000510576 MARCH4Q9P2E8 410 aaPredicted RBP16.65■□□□□ 0.26
CLMAT3-201ENST00000510576 A8MT66 165 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 IPO13O94829 963 aaKnown RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 GLP2RO95838 553 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 EPOP01588 193 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 ERFP50548 548 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 GNA12Q03113 381 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 ACVR1Q04771 509 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 GALNT3Q14435 633 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 TCTN1Q2MV58 587 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 SNX32Q86XE0 403 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 DNAJC5GQ8N7S2 189 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 PDZD8Q8NEN9 1154 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 RP9Q8TA86 221 aaKnown RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 SHKBP1Q8TBC3 707 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 JADE3Q92613 823 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 DNAJC1Q96KC8 554 aaKnown RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 UBXN10Q96LJ8 280 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 TBATAQ96M53 351 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 CEP295NLQ96MC4 621 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 CATSPER2Q96P56 530 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 ZNF385DQ9H6B1 395 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 EML4Q9HC35 981 aaKnown RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 CYP4F12Q9HCS2 524 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 TANC1Q9C0D5 1861 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 PITPNM1O00562 1244 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 RPP40O75818 363 aaKnown RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 GOT2P00505 430 aaKnown RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 JUNP05412 331 aaKnown RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 HOXD9P28356 352 aaPredicted RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 SLC26A3P40879 764 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 CDKN2DP55273 166 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 IL31Q6EBC2 164 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 MRNIPQ6NTE8 343 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 C16orf89Q6UX73 402 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 FAM43BQ6ZT52 329 aaPredicted RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 SLC22A9Q8IVM8 553 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 LRRC43Q8N309 656 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 FBXW8Q8N3Y1 598 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 PNPLA1Q8N8W4 532 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 OR7D4Q8NG98 312 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 FAR2Q96K12 515 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 ZNF512Q96ME7 567 aaPredicted RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 SEPT3Q9UH03 358 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 CORO1CQ9ULV4 474 aaPredicted RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 ARL5AQ9Y689 179 aa16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 ZFP37Q9Y6Q3 630 aaPredicted RBP16.64■□□□□ 0.25
CLMAT3-201ENST00000510576 A0A0D9SEW6 157 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 TMEM233B4DJY2 109 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 LIN7AO14910 233 aaPredicted RBP16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 CD3EAPO15446 510 aaKnown RBP16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 ADAM12O43184 909 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 NDST3O95803 873 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 BAG2O95816 211 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 NUDT2P50583 147 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 CDH4P55283 916 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 CYLC2Q14093 348 aaPredicted RBP16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 HERC3Q15034 1050 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 ALG1LQ6GMV1 187 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 GPR150Q8NGU9 434 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 BRSK1Q8TDC3 778 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 ANKRD49Q8WVL7 239 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 OVCA2Q8WZ82 227 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 CCDC124Q96CT7 223 aaKnown RBP16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 TTC1Q99614 292 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 MGME1Q9BQP7 344 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 CINPQ9BW66 212 aaPredicted RBP16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 SUDS3Q9H7L9 328 aaPredicted RBP16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 S100A14Q9HCY8 104 aa16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 UBA2Q9UBT2 640 aaPredicted RBP16.63■□□□□ 0.25
CLMAT3-201ENST00000510576 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 CCDC162PA2VCL2 907 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 AIM2O14862 343 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 WISP3O95389 354 aaPredicted RBP16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 HNRNPLP14866 589 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 HOXB8P17481 243 aaPredicted RBP16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 KCNA5P22460 613 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 ABL2P42684 1182 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 TUFMP49411 452 aaKnown RBP16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 OXCT1P55809 520 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 SATB1Q01826 763 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 HECTD3Q5T447 861 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 TMEM198Q66K66 360 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 SLC8B1Q6J4K2 584 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 KIRREL3Q8IZU9 778 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 CRIPAKQ8N1N5 446 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 SPON2Q9BUD6 331 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 CATSPERZQ9NTU4 200 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 MTRRQ9UBK8 725 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 RIMKLBQ9ULI2 386 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 PPM1HQ9ULR3 514 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 CRYL1Q9Y2S2 319 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 SDHDO14521 159 aa16.62■□□□□ 0.25
CLMAT3-201ENST00000510576 BUD23O43709 281 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms