RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 AFMIDQ63HM1 303 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 LVRNQ6Q4G3 990 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 ZFAND4Q86XD8 727 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 NRROSQ86YC3 692 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 SLITRK4Q8IW52 837 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 FSTL5Q8N475 847 aaPredicted RBP13.46□□□□□ -0.25
DDX41-210ENST00000509576 FBXO39Q8N4B4 442 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 ARL14Q8N4G2 192 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 Q8N9G6 341 aaPredicted RBP13.46□□□□□ -0.25
DDX41-210ENST00000509576 EXTL1Q92935 676 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 ECHDC3Q96DC8 303 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 MCEEQ96PE7 176 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 GFM1Q96RP9 751 aaKnown RBP13.46□□□□□ -0.25
DDX41-210ENST00000509576 TRIM7Q9C029 511 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 TMEM168Q9H0V1 697 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 SEMA6CQ9H3T2 930 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 PISDQ9UG56 409 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 HPCAL4Q9UM19 191 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 DAAM1Q9Y4D1 1078 aa13.46□□□□□ -0.25
DDX41-210ENST00000509576 TRAFD1O14545 582 aaPredicted RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 TOR1BO14657 336 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 B4GAT1O43505 415 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 PRAMEF11O60813 436 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 RECQL5O94762 991 aaPredicted RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 RASGRP1O95267 797 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 EEF1GP26641 437 aaKnown RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 ZNF143P52747 638 aaPredicted RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 YBEYP58557 167 aaPredicted RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 CYP4F2P78329 520 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 B4GALNT1Q00973 533 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 HLTFQ14527 1009 aaKnown RBP eCLIP13.45□□□□□ -0.26
DDX41-210ENST00000509576 C16orf72Q14CZ0 275 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 ELOCQ15369 112 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 PARP15Q460N3 678 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 CERCAMQ5T4B2 595 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 ESRP1Q6NXG1 681 aaKnown RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 SCYL2Q6P3W7 929 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 LIPIQ6XZB0 460 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 ZNF574Q6ZN55 896 aaPredicted RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 SPRED1Q7Z699 444 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 ZNF354CQ86Y25 554 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 CCNJLQ8IV13 435 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 MSANTD4Q8NCY6 345 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 CASKIN2Q8WXE0 1202 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 WDR92Q96MX6 357 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 UBA2Q9UBT2 640 aaPredicted RBP13.45□□□□□ -0.26
DDX41-210ENST00000509576 KLQ9UEF7 1012 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 ATP8A1Q9Y2Q0 1164 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 LOXL2Q9Y4K0 774 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 DGKBQ9Y6T7 804 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 NBPF19A0A087WUL8 3843 aa13.45□□□□□ -0.26
DDX41-210ENST00000509576 A0A0U1RQS6 177 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 A8MX80 341 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 SLC28A2O43868 658 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 TRIM23P36406 574 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 PAPOLAP51003 745 aaKnown RBP13.44□□□□□ -0.26
DDX41-210ENST00000509576 MAZP56270 477 aaKnown RBP13.44□□□□□ -0.26
DDX41-210ENST00000509576 MTM1Q13496 603 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 SYCP1Q15431 976 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 TRIM72Q6ZMU5 477 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 C17orf82Q86X59 251 aaPredicted RBP13.44□□□□□ -0.26
DDX41-210ENST00000509576 DTX1Q86Y01 620 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 WDR48Q8TAF3 677 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 PATE1Q8WXA2 126 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 GLMNQ92990 594 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 KCTD15Q96SI1 283 aaPredicted RBP13.44□□□□□ -0.26
DDX41-210ENST00000509576 SELENOOQ9BVL4 669 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 SPATS2LQ9NUQ6 558 aaKnown RBP13.44□□□□□ -0.26
DDX41-210ENST00000509576 APPL1Q9UKG1 709 aa13.44□□□□□ -0.26
DDX41-210ENST00000509576 NBASA2RRP1 2371 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 B4DGG1 531 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 TERTO14746 1132 aaKnown RBP13.43□□□□□ -0.26
DDX41-210ENST00000509576 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
DDX41-210ENST00000509576 PEX11BO96011 259 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 ALPIP09923 528 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 FAM87AP0C7U9 286 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 CCL4P13236 92 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 CTSEP14091 401 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 NSFP46459 744 aaKnown RBP13.43□□□□□ -0.26
DDX41-210ENST00000509576 BLKP51451 505 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 COPB1P53618 953 aaKnown RBP13.43□□□□□ -0.26
DDX41-210ENST00000509576 KIAA1024LP59773 190 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 ELP6Q0PNE2 266 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 NFATC3Q12968 1075 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 EFHC2Q5JST6 749 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 RFLNAQ6ZTI6 216 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 SRLQ86TD4 932 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 JAMLQ86YT9 394 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 ENOX1Q8TC92 643 aaKnown RBP13.43□□□□□ -0.26
DDX41-210ENST00000509576 HCAR2Q8TDS4 363 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 CCDC97Q96F63 343 aaPredicted RBP13.43□□□□□ -0.26
DDX41-210ENST00000509576 SMIM14Q96QK8 99 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 NUDT22Q9BRQ3 303 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 CNPY3Q9BT09 278 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 C1QTNF7Q9BXJ2 289 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 ZNF106Q9H2Y7 1883 aaKnown RBP13.43□□□□□ -0.26
DDX41-210ENST00000509576 RDH14Q9HBH5 336 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 STARD5Q9NSY2 213 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 FANCLQ9NW38 375 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms