RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 APOL2Q9BQE5 337 aa10.39□□□□□ -0.75
PTPN20-220ENST00000508715 VPS45Q9NRW7 570 aa10.39□□□□□ -0.75
PTPN20-220ENST00000508715 HOMER3Q9NSC5 361 aa10.39□□□□□ -0.75
PTPN20-220ENST00000508715 TMEM74BQ9NUR3 256 aa10.39□□□□□ -0.75
PTPN20-220ENST00000508715 RNF14Q9UBS8 474 aa10.39□□□□□ -0.75
PTPN20-220ENST00000508715 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.39□□□□□ -0.75
PTPN20-220ENST00000508715 COQ6Q9Y2Z9 468 aa10.39□□□□□ -0.75
PTPN20-220ENST00000508715 MRFAP1Q9Y605 127 aa10.39□□□□□ -0.75
PTPN20-220ENST00000508715 CEP250Q9BV73 2442 aa10.39□□□□□ -0.75
PTPN20-220ENST00000508715 GOLGA4Q13439 2230 aaKnown RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 LAMA1P25391 3075 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 ZFC3H1O60293 1989 aaKnown RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3DA0A087WVF3 549 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3IA0A087WXS9 549 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3EA0A087X179 549 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3KA0A087X1G2 549 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 A0A1W2PQU0 124 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3FA6NER0 549 aaPredicted RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 IGLON5A6NGN9 336 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3LB9A6J9 549 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 AURKAO14965 403 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 RAD51BO15315 384 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TP73O15350 636 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 RNGTTO60942 597 aaKnown RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 URI1O94763 535 aaPredicted RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 NDST3O95803 873 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 EPOP01588 193 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 KRT14P02533 472 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3HP0C7X1 549 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 PIRTP0C851 137 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 ITPKAP23677 461 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 MAT2AP31153 395 aaKnown RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 CCR5P51681 352 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 GEMP55040 296 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 NHLH1Q02575 133 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 C2orf54Q08AI8 447 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 SEMA5AQ13591 1074 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 SLC1A5Q15758 541 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 SIRPB2Q5JXA9 342 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 PEAR1Q5VY43 1037 aaPredicted RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 ANKRD22Q5VYY1 191 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3GQ6DHY5 549 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3CQ6IPX1 549 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 CRTC1Q6UUV9 634 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 SLC36A4Q6YBV0 504 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 MICALCLQ6ZW33 695 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 ZNF534Q76KX8 674 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 DPPA4Q7L190 304 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TRIM69Q86WT6 500 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 HORMAD1Q86X24 394 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 KLHL7Q8IXQ5 586 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 TBC1D3Q8IZP1 549 aaPredicted RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 PELI3Q8N2H9 469 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 SLC25A41Q8N5S1 370 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 LPCAT1Q8NF37 534 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 DNASE2BQ8WZ79 361 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 RAB7BQ96AH8 199 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 SPACA7Q96KW9 195 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 LYSMD1Q96S90 227 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 KLF6Q99612 283 aaPredicted RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 WRAP53Q9BUR4 548 aaKnown RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 FICDQ9BVA6 458 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 C1QTNF2Q9BXJ5 285 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 ARNT2Q9HBZ2 717 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 PREBQ9HCU5 417 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 DYRK4Q9NR20 520 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 EIF2B4Q9UI10 523 aaKnown RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 CA5BQ9Y2D0 317 aa10.38□□□□□ -0.75
PTPN20-220ENST00000508715 ARHGEF17Q96PE2 2063 aaPredicted RBP10.38□□□□□ -0.75
PTPN20-220ENST00000508715 ATXN2Q99700 1313 aaKnown RBP10.37□□□□□ -0.75
PTPN20-220ENST00000508715 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.37□□□□□ -0.75
PTPN20-220ENST00000508715 A0A1W2PQ67 120 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 CAPN8A6NHC0 703 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 LRRC72A6NJI9 287 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 PROB1E7EW31 1015 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 CCDC188H7C350 402 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 KIF2AO00139 706 aaPredicted RBP10.37□□□□□ -0.75
PTPN20-220ENST00000508715 MAP3K13O43283 966 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 TSPAN6O43657 245 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 NDUFS2O75306 463 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 ZNF189O75820 626 aaPredicted RBP10.37□□□□□ -0.75
PTPN20-220ENST00000508715 ANXA9O76027 345 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 STK10O94804 968 aaKnown RBP10.37□□□□□ -0.75
PTPN20-220ENST00000508715 SUN1O94901 812 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 HEXIM1O94992 359 aaKnown RBP10.37□□□□□ -0.75
PTPN20-220ENST00000508715 FSBPO95073 299 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 PCDH8O95206 1070 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 CLDN7O95471 211 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 AP2A1O95782 977 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 TUBB4AP04350 444 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 WNT1P04628 370 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 C1SP09871 688 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 VIPR1P32241 457 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 PAFAH1B1P43034 410 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 MAGEA6P43360 314 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 GRIA4P48058 902 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 VPS41P49754 854 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 LIG3P49916 1009 aa10.37□□□□□ -0.75
PTPN20-220ENST00000508715 SUOXP51687 545 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms