RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 HPS4Q9NQG7 708 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 INTS7Q9NVH2 962 aaKnown RBP4.76□□□□□ -1.65
NUP54-206ENST00000508465 C2orf42Q9NWW7 574 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 THG1LQ9NWX6 298 aaKnown RBP4.76□□□□□ -1.65
NUP54-206ENST00000508465 DUS2Q9NX74 493 aaKnown RBP4.76□□□□□ -1.65
NUP54-206ENST00000508465 DLGAP2Q9P1A6 1054 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 CFAP97Q9P2B7 532 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 UXTQ9UBK9 157 aaPredicted RBP4.76□□□□□ -1.65
NUP54-206ENST00000508465 B4GALT6Q9UBX8 382 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 SPO11Q9Y5K1 396 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 WNT6Q9Y6F9 365 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 R4GN57 208 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 MYO15AQ9UKN7 3530 aa4.76□□□□□ -1.65
NUP54-206ENST00000508465 ATP8B3O60423 1300 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 MUC6Q6W4X9 2439 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 TSC2P49815 1807 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 DMXL1Q9Y485 3027 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 FAM170AA1A519 330 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 BICDL2A1A5D9 508 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 HHLA1C9JL84 531 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 SPECC1L-ADORA2AF8WAN1 911 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 PLD2O14939 933 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 MDM4O15151 490 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 COCHO43405 550 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 OPA1O60313 960 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 NRP2O60462 931 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 RTN3O95197 1032 aaPredicted RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 LY86O95711 162 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 IRF1P10914 325 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 CHRNB1P11230 501 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 CD19P15391 556 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 MTIF2P46199 727 aaKnown RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 SLC5A3P53794 718 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 ENPEPQ07075 957 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 INCA1Q0VD86 236 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 MTAPQ13126 283 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 CUL2Q13617 745 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 RUNX3Q13761 415 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 GOLGA7BQ2TAP0 167 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 DPCR1Q3MIW9 517 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 ARHGAP29Q52LW3 1261 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 HECTD3Q5T447 861 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 GJB7Q6PEY0 223 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 UBE2R2Q712K3 238 aaPredicted RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 SCD5Q86SK9 330 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 SFTPA1Q8IWL2 248 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 MAML2Q8IZL2 1156 aaPredicted RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 PPM1KQ8N3J5 372 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 LMO3Q8TAP4 145 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 DEPDC1BQ8WUY9 529 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 TFAP2BQ92481 460 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 CLDN23Q96B33 292 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 SMARCD1Q96GM5 515 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 NELL2Q99435 816 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 DNAJC7Q99615 494 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 TTLL2Q9BWV7 592 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 DUSP16Q9BY84 665 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 GTPBP4Q9BZE4 634 aaKnown RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 INTS2Q9H0H0 1204 aaKnown RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 NMUR1Q9HB89 426 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 METTL14Q9HCE5 456 aaKnown RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 CSNK1G1Q9HCP0 422 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 UBE2TQ9NPD8 197 aaPredicted RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 DMAP1Q9NPF5 467 aaPredicted RBP4.75□□□□□ -1.65
NUP54-206ENST00000508465 OSER1Q9NX31 292 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 RWDD2AQ9UIY3 292 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 COQ4Q9Y3A0 265 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.75□□□□□ -1.65
NUP54-206ENST00000508465 CPQQ9Y646 472 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 DMDP11532 3685 aa4.75□□□□□ -1.65
NUP54-206ENST00000508465 ZNF318Q5VUA4 2279 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 FAM221BA6H8Z2 402 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 PES1O00541 588 aaKnown RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 FGFR1OPO95684 399 aaKnown RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 OAS1P00973 400 aaKnown RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 EGFP01133 1207 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 IGLV2-14P01704 120 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 AFPP02771 609 aaKnown RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 HMBSP08397 361 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 CLEC2LP0C7M8 214 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 SP9P0CG40 484 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 CCDC192P0DO97 292 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 EGR2P11161 476 aaPredicted RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 MBL2P11226 248 aaPredicted RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 KRT5P13647 590 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 MPLP40238 635 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 USP8P40818 1118 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 PPP1R2P41236 205 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 IFNAR2P48551 515 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 PXNP49023 591 aaPredicted RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 RGS7P49802 495 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 SLC7A9P82251 487 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 DMWDQ09019 674 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 SERINC3Q13530 473 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 TP53BP2Q13625 1128 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 ZNF268Q14587 947 aaPredicted RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 MTF1Q14872 753 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 ZNF77Q15935 545 aa4.74□□□□□ -1.65
NUP54-206ENST00000508465 TPD52L1Q16890 204 aaPredicted RBP4.74□□□□□ -1.65
NUP54-206ENST00000508465 PDCD4Q53EL6 469 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms