RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 MCOLN2Q8IZK6 566 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 THEM5Q8N1Q8 247 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 PBKQ96KB5 322 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SENP8Q96LD8 212 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 PCDHB18PQ96TA0 734 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 MTG2Q9H4K7 406 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 LIN28AQ9H9Z2 209 aaKnown RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SLC6A20Q9NP91 592 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SIRT5Q9NXA8 310 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 KIAA1671Q9BY89 1806 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 MIF4GDA9UHW6 222 aaKnown RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SYT5O00445 386 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 CASQ2O14958 399 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 ERBB2P04626 1255 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 MYL4P12829 197 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 CD58P19256 250 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 CD9P21926 228 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 MMP8P22894 467 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 TNFRSF8P28908 595 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SLC1A1P43005 524 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SLC6A9P48067 706 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 RPL34P49207 117 aaKnown RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SLC8A3P57103 927 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 YBEYP58557 167 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SPIDRQ14159 915 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 RCN1Q15293 331 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 GLRA4Q5JXX5 417 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 MON1BQ7L1V2 547 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 ARCQ7LC44 396 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SPATA2LQ8IUW3 424 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 GSPT2Q8IYD1 628 aaKnown RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 AENQ8WTP8 325 aaKnown RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 MRGPRX1Q96LB2 322 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 ACBD6Q9BR61 282 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 ELOVL4Q9GZR5 314 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SEPT11Q9NVA2 429 aaKnown RBP7.24□□□□□ -1.25
CLCN3-206ENST00000507875 PARVAQ9NVD7 372 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 MIOSQ9NXC5 875 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 HESX1Q9UBX0 185 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 SH3BGRL2Q9UJC5 107 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 PTPRSQ13332 1948 aa7.24□□□□□ -1.25
CLCN3-206ENST00000507875 A0A0A0MRY4 1105 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 A8MXQ7 604 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 TMEM233B4DJY2 109 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 O00370 1275 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 ZSCAN9O15535 394 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 FAM87AP0C7U9 286 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 DNAJB1P25685 340 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 ARFIP1P53367 373 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 BCAT1P54687 386 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 MRPS25P82663 173 aaKnown RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 CLLU1OSQ5K130 101 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 BTBD8Q5XKL5 378 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 PLEKHA7Q6IQ23 1121 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 ARHGAP11AQ6P4F7 1023 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 SCARA5Q6ZMJ2 495 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 PEX26Q7Z412 305 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 ERICH1Q86X53 443 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 SCML4Q8N228 414 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 OR6B3Q8NGW1 331 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 ACTRT1Q8TDG2 376 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 KBTBD7Q8WVZ9 684 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 LPPQ93052 612 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 SAMD11Q96NU1 681 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 CASD1Q96PB1 797 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 TMEM237Q96Q45 408 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 HNRNPABQ99729 332 aaKnown RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 GOLPH3Q9H4A6 298 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 IL23AQ9NPF7 189 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 PLA2G2EQ9NZK7 142 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 MAGEL2Q9UJ55 1249 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 TMEM59LQ9UK28 342 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 HPCAL4Q9UM19 191 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 PRELID1Q9Y255 219 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 NUMBLQ9Y6R0 609 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 TMEM265A0A087WTH1 108 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 MASP2O00187 686 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 CD19P15391 556 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 HDCP19113 662 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 ITGB8P26012 769 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 IDUAP35475 653 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 HSD17B2P37059 387 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 CLCNKBP51801 687 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 RNASE9P60153 205 aaKnown RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 NRG1Q02297 640 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 SSPNQ14714 243 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 OASLQ15646 514 aaKnown RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 TSTQ16762 297 aaKnown RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 C9orf50Q5SZB4 431 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 LPCAT2Q7L5N7 544 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 NT5DC3Q86UY8 548 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 FAM71BQ8TC56 605 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 ZNF653Q96CK0 615 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 CFAP36Q96G28 342 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 ZNF845Q96IR2 970 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-206ENST00000507875 HSFY1Q96LI6 401 aa7.23□□□□□ -1.25
CLCN3-206ENST00000507875 GDAP1L1Q96MZ0 367 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms