RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 KIAA1324Q6UXG2 1013 aaKnown RBP14.25□□□□□ -0.13
RNF4-208ENST00000507247 CCNI2Q6ZMN8 369 aaPredicted RBP14.25□□□□□ -0.13
RNF4-208ENST00000507247 ERN2Q76MJ5 926 aaKnown RBP14.25□□□□□ -0.13
RNF4-208ENST00000507247 TSTD1Q8NFU3 115 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 SIGLEC10Q96LC7 697 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 MCCC1Q96RQ3 725 aaPredicted RBP14.25□□□□□ -0.13
RNF4-208ENST00000507247 FMO2Q99518 471 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 WDR83Q9BRX9 315 aaKnown RBP14.25□□□□□ -0.13
RNF4-208ENST00000507247 IER2Q9BTL4 223 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 HDAC8Q9BY41 377 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 FRMD8Q9BZ67 464 aaPredicted RBP14.25□□□□□ -0.13
RNF4-208ENST00000507247 PCDH12Q9NPG4 1184 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 DYRK4Q9NR20 520 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 SYBUQ9NX95 663 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 GGT7Q9UJ14 662 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 RAB21Q9UL25 225 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 CAPN8A6NHC0 703 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 NPIPB15A6NHN6 443 aaPredicted RBP14.24□□□□□ -0.13
RNF4-208ENST00000507247 PRR33A8MZF0 331 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 E7ESA3 106 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 AURKAO14965 403 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 DNTTP04053 509 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 FAM153BP0C7A2 387 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 HNF1BP35680 557 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 NPY2RP49146 381 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 CLCN5P51795 746 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 PDIA2Q13087 525 aaKnown RBP14.24□□□□□ -0.13
RNF4-208ENST00000507247 POU6F1Q14863 301 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 FASTKD3Q14CZ7 662 aaKnown RBP14.24□□□□□ -0.13
RNF4-208ENST00000507247 BBS9Q3SYG4 887 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 FAM153CQ494X1 144 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 HP1BP3Q5SSJ5 553 aaPredicted RBP14.24□□□□□ -0.13
RNF4-208ENST00000507247 AGBL4Q5VU57 503 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 ANO7Q6IWH7 933 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 FBXL19Q6PCT2 694 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 TTC7BQ86TV6 843 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 TSPAN33Q86UF1 283 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 HDDC3Q8N4P3 179 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 EIF1ADQ8N9N8 165 aaKnown RBP14.24□□□□□ -0.13
RNF4-208ENST00000507247 MDGA1Q8NFP4 955 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 BLOC1S5Q8TDH9 187 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 FAM131CQ96AQ9 280 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 SCRN2Q96FV2 425 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 B4GALT6Q9UBX8 382 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 MTRF1LQ9UGC7 380 aaKnown RBP14.24□□□□□ -0.13
RNF4-208ENST00000507247 EBF1Q9UH73 591 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 ITM2BQ9Y287 266 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 ZNF106Q9H2Y7 1883 aaKnown RBP14.24□□□□□ -0.13
RNF4-208ENST00000507247 NUMA1Q14980 2115 aa14.24□□□□□ -0.13
RNF4-208ENST00000507247 A8MX80 341 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 K7ESF4 209 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 AREL1O15033 823 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 RNASEH2AO75792 299 aaKnown RBP14.23□□□□□ -0.13
RNF4-208ENST00000507247 LHCGRP22888 699 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 XPAP23025 273 aaPredicted RBP14.23□□□□□ -0.13
RNF4-208ENST00000507247 MMP12P39900 470 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 TAS2R38P59533 333 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 POLR2LP62875 67 aaKnown RBP14.23□□□□□ -0.13
RNF4-208ENST00000507247 FAM193AP78312 1265 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 ZBTB16Q05516 673 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 RALGDSQ12967 914 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 CBLBQ13191 982 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 CDKN3Q16667 212 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 CCDC38Q502W7 563 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.23□□□□□ -0.13
RNF4-208ENST00000507247 USP45Q70EL2 814 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 LYSMD3Q7Z3D4 306 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 RASSF3Q86WH2 238 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 CCDC25Q86WR0 208 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 IGDCC3Q8IVU1 814 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 PDIK1LQ8N165 341 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 PGBD3Q8N328 593 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 TTC30BQ8N4P2 665 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 TMEM105Q8N8V8 129 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 PBXIP1Q96AQ6 731 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 LYSMD1Q96S90 227 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 OMDQ99983 421 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 TRIM56Q9BRZ2 755 aaKnown RBP14.23□□□□□ -0.13
RNF4-208ENST00000507247 FOXP3Q9BZS1 431 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 MAGEE1Q9HCI5 957 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 SAYSD1Q9NPB0 183 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 FBXL12Q9NXK8 326 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 BFARQ9NZS9 450 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 BCCIPQ9P287 314 aaKnown RBP eCLIP14.23□□□□□ -0.13
RNF4-208ENST00000507247 SCML1Q9UN30 329 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 ZNF711Q9Y462 761 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 PLXND1Q9Y4D7 1925 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 KMT2EQ8IZD2 1858 aa14.23□□□□□ -0.13
RNF4-208ENST00000507247 DOCK9Q9BZ29 2069 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 CCDC78A2IDD5 438 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 SDR42E2A6NKP2 422 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 AP3B1O00203 1094 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 EIF3HO15372 352 aaKnown RBP eCLIP14.22□□□□□ -0.13
RNF4-208ENST00000507247 PAPSS2O95340 614 aaPredicted RBP14.22□□□□□ -0.13
RNF4-208ENST00000507247 CLDN7O95471 211 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 VIPR1P32241 457 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 PLA2G5P39877 138 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 ELK3P41970 407 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 CXCL12P48061 93 aa14.22□□□□□ -0.13
RNF4-208ENST00000507247 SEPT6Q14141 434 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms