RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SYPL2Q5VXT5 272 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 PAPD7Q5XG87 772 aaKnown RBP7.26□□□□□ -1.25
VCAN-207ENST00000507162 PMF1Q6P1K2 205 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 CCDC73Q6ZRK6 1079 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 SCML4Q8N228 414 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 NXPE1Q8N323 547 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 FDCSPQ8NFU4 85 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 OR56A4Q8NGH8 313 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 OR6K2Q8NGY2 324 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 PATE1Q8WXA2 126 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 ARHGEF26Q96DR7 871 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 ELMO2Q96JJ3 720 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 KLHL32Q96NJ5 620 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 PRMT1Q99873 361 aaKnown RBP7.26□□□□□ -1.25
VCAN-207ENST00000507162 TMUB1Q9BVT8 246 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 TRIM8Q9BZR9 551 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 TM6SF2Q9BZW4 377 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 COX16Q9P0S2 106 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 KLHL3Q9UH77 587 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 PADI1Q9ULC6 663 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 VANGL2Q9ULK5 521 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 NEU2Q9Y3R4 380 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 DGKBQ9Y6T7 804 aa7.26□□□□□ -1.25
VCAN-207ENST00000507162 A0A0D9SEW6 157 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 TMEM202A6NGA9 273 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 H3BQV1 296 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 KRIT1O00522 736 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 CLDN11O75508 207 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 ZNF821O75541 412 aaPredicted RBP7.25□□□□□ -1.25
VCAN-207ENST00000507162 KIAA0754O94854 1291 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 BMP15O95972 392 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 UGT2B4P06133 528 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 BMP6P22004 513 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 GGCXP38435 758 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 GCLMP48507 274 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 ANAPC15P60006 121 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 RPS18P62269 152 aaKnown RBP7.25□□□□□ -1.25
VCAN-207ENST00000507162 AUHQ13825 339 aaKnown RBP7.25□□□□□ -1.25
VCAN-207ENST00000507162 MIIPQ5JXC2 388 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 ARHGAP22Q7Z5H3 698 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 ZNF761Q86XN6 746 aaPredicted RBP7.25□□□□□ -1.25
VCAN-207ENST00000507162 RASGRP3Q8IV61 690 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 PARP9Q8IXQ6 854 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 C12orf56Q8IXR9 622 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 FAM186BQ8IYM0 893 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 PDILTQ8N807 584 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 ST6GALNAC3Q8NDV1 305 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 TAS1R2Q8TE23 839 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 CT55Q8WUE5 264 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 THAP4Q8WY91 577 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 NCSTNQ92542 709 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 CLIC6Q96NY7 704 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 NUDT9Q9BW91 350 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 ILKAPQ9H0C8 392 aaPredicted RBP7.25□□□□□ -1.25
VCAN-207ENST00000507162 SIK2Q9H0K1 926 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 ACTL8Q9H568 366 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 FGF22Q9HCT0 170 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 SLC39A2Q9NP94 309 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 AGPAT4Q9NRZ5 378 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 TAAR2Q9P1P5 351 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 CGNQ9P2M7 1197 aaKnown RBP7.25□□□□□ -1.25
VCAN-207ENST00000507162 LNPEPQ9UIQ6 1025 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 FCF1Q9Y324 198 aaKnown RBP7.25□□□□□ -1.25
VCAN-207ENST00000507162 PCDHGB6Q9Y5F9 930 aa7.25□□□□□ -1.25
VCAN-207ENST00000507162 KLF2Q9Y5W3 355 aaPredicted RBP7.25□□□□□ -1.25
VCAN-207ENST00000507162 A0A1B0GUH1 482 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 TMEM200CA6NKL6 621 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 CACNB4O00305 520 aaPredicted RBP7.24□□□□□ -1.25
VCAN-207ENST00000507162 IKBKBO14920 756 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 AREL1O15033 823 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 TRUB2O95900 331 aaKnown RBP7.24□□□□□ -1.25
VCAN-207ENST00000507162 RECKO95980 971 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 SETSIPP0DME0 302 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 XPAP23025 273 aaPredicted RBP7.24□□□□□ -1.25
VCAN-207ENST00000507162 AK4P27144 223 aaPredicted RBP7.24□□□□□ -1.25
VCAN-207ENST00000507162 MAPK9P45984 424 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 SQSTM1Q13501 440 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 NR1D2Q14995 579 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 UGT8Q16880 541 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 KNOP1Q1ED39 458 aaKnown RBP7.24□□□□□ -1.25
VCAN-207ENST00000507162 C1orf220Q5T0J3 134 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 HGSNATQ68CP4 663 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 RETSATQ6NUM9 610 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 SLC30A9Q6PML9 568 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 C17orf82Q86X59 251 aaPredicted RBP7.24□□□□□ -1.25
VCAN-207ENST00000507162 TTC39CQ8N584 583 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 PCDH20Q8N6Y1 951 aaKnown RBP7.24□□□□□ -1.25
VCAN-207ENST00000507162 PLA2G15Q8NCC3 412 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 OR7D4Q8NG98 312 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 OR10G6Q8NH81 332 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 TMC2Q8TDI7 906 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 UBE2Q2Q8WVN8 375 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 RUFY1Q96T51 708 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 SLC38A3Q99624 504 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 GSDMCQ9BYG8 508 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 CARS2Q9HA77 564 aaKnown RBP7.24□□□□□ -1.25
VCAN-207ENST00000507162 PDP2Q9P2J9 529 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 B3GNT3Q9Y2A9 372 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 NTNG1Q9Y2I2 539 aa7.24□□□□□ -1.25
VCAN-207ENST00000507162 TBC1D30Q9Y2I9 924 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms