RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 CDT1Q9H211 546 aa3.67□□□□□ -1.82
SSBP2-206ENST00000506960 PDCL3Q9H2J4 239 aa3.67□□□□□ -1.82
SSBP2-206ENST00000506960 ZNF556Q9HAH1 456 aa3.67□□□□□ -1.82
SSBP2-206ENST00000506960 C20orf141Q9NUB4 165 aa3.67□□□□□ -1.82
SSBP2-206ENST00000506960 SPATS2LQ9NUQ6 558 aaKnown RBP3.67□□□□□ -1.82
SSBP2-206ENST00000506960 KCND2Q9NZV8 630 aa3.67□□□□□ -1.82
SSBP2-206ENST00000506960 MPP6Q9NZW5 540 aa3.67□□□□□ -1.82
SSBP2-206ENST00000506960 SLC25A10Q9UBX3 287 aaPredicted RBP3.67□□□□□ -1.82
SSBP2-206ENST00000506960 ABCC10Q5T3U5 1492 aa3.67□□□□□ -1.82
SSBP2-206ENST00000506960 MAPKBP1O60336 1514 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 RUSC2Q8N2Y8 1516 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 RIMS1Q86UR5 1692 aaKnown RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 A0A1W2PPH5 198 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 TTC36A6NLP5 189 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 KDM4EB2RXH2 506 aaPredicted RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 VWA5AO00534 786 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 PRSS2P07478 247 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 FCGR1AP12314 374 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 ZNF12P17014 697 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 ZNF8P17098 575 aaPredicted RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 GNLYP22749 145 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 DDIT3P35638 169 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 DSC1Q08554 894 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 DDX10Q13206 875 aaKnown RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 PPP2R5BQ15173 497 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 H1FNTQ75WM6 255 aaPredicted RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 R3HCC1LQ7Z5L2 792 aaKnown RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 TBC1D26Q86UD7 250 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 DENND6AQ8IWF6 608 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 CNTROBQ8N137 903 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 CLIP4Q8N3C7 705 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 MIGA1Q8NAN2 632 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 NEXN-AS1Q8NBZ9 246 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 TMEM170AQ8WVE7 144 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 OTULINQ96BN8 352 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 SIN3AQ96ST3 1273 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 YME1L1Q96TA2 773 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 LBHD1Q9BQE6 289 aaPredicted RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 CARD8Q9Y2G2 431 aa3.66□□□□□ -1.82
SSBP2-206ENST00000506960 SRPRBQ9Y5M8 271 aaKnown RBP3.66□□□□□ -1.82
SSBP2-206ENST00000506960 SMTNL1A8MU46 457 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 BTBD18B2RXH4 712 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 SNAP23O00161 211 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 EBAG9O00559 213 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 ZNF432O94892 652 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 SOX30O94993 753 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 ZBTB11O95625 1053 aaPredicted RBP3.65□□□□□ -1.83
SSBP2-206ENST00000506960 CD4P01730 458 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 IRF1P10914 325 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 PTPN2P17706 415 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 EDN2P20800 178 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 TNFAIP3P21580 790 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 CCR9P51686 369 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 RARSP54136 660 aaKnown RBP3.65□□□□□ -1.83
SSBP2-206ENST00000506960 ERVFC1-1P60608 527 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 MPP1Q00013 466 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 CYP4A11Q02928 519 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 FOXD4Q12950 439 aaPredicted RBP3.65□□□□□ -1.83
SSBP2-206ENST00000506960 TRAF3Q13114 568 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 ARHGEF6Q15052 776 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 TSTQ16762 297 aaKnown RBP3.65□□□□□ -1.83
SSBP2-206ENST00000506960 SLC9B1Q4ZJI4 515 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 TDRD12Q587J7 1177 aaKnown RBP3.65□□□□□ -1.83
SSBP2-206ENST00000506960 LRRC8EQ6NSJ5 796 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 CREB3L2Q70SY1 520 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 CPLX4Q7Z7G2 160 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 ZNF329Q86UD4 541 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 ZMIZ2Q8NF64 920 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 NPFFR1Q9GZQ6 430 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 MVB12BQ9H7P6 319 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 TAS2R10Q9NYW0 307 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 ZNF69Q9UC07 566 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 FAM96BQ9Y3D0 163 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 MADDQ8WXG6 1647 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 CUX1P39880 1505 aa3.65□□□□□ -1.83
SSBP2-206ENST00000506960 MAP3K4Q9Y6R4 1608 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 CBY3A6NI87 242 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 SRRM3A6NNA2 597 aaPredicted RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 HSPB2A8KAH6 182 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 LDLRAD4O15165 306 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 BCAT2O15382 392 aaPredicted RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 TNFSF14O43557 240 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 ITM2AO43736 263 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 DDNO94850 711 aaPredicted RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 IGKV3-20P01619 116 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 EPHA8P29322 1005 aaPredicted RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 DCTDP32321 178 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 CENPAP49450 140 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 EIF3BP55884 814 aaKnown RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 GEMIN4P57678 1058 aaKnown RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 SEC61A1P61619 476 aaKnown RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 PTP4A2Q12974 167 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 COASYQ13057 564 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 ITGADQ13349 1161 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 HSPB2Q16082 182 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 HIST2H2ACQ16777 129 aaPredicted RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 PLEKHO1Q53GL0 409 aaPredicted RBP3.64□□□□□ -1.83
SSBP2-206ENST00000506960 FAM76BQ5HYJ3 339 aa3.64□□□□□ -1.83
SSBP2-206ENST00000506960 FAM180BQ6P0A1 224 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms