RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PMPCAQ10713 525 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 RUNX2Q13950 521 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 FGFBP1Q14512 234 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 NTRK2Q16620 822 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMEM266Q2M3C6 531 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 BMP2KLQ5H9B9 411 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 GARNL3Q5VVW2 1013 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TBC1D9BQ66K14 1250 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 RPUSD3Q6P087 351 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 AAGABQ6PD74 315 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 GLDNQ6ZMI3 551 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 AMIGO2Q86SJ2 522 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TBC1D26Q86UD7 250 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 CCDC25Q86WR0 208 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMC8Q8IU68 726 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 KIAA2013Q8IYS2 634 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADGRF4Q8IZF3 695 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SCML4Q8N228 414 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 KCTD6Q8NC69 237 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 OR4N2Q8NGD1 307 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZNF398Q8TD17 642 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SGCDQ92629 289 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 KAT2AQ92830 837 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SAT2Q96F10 170 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 BBS4Q96RK4 519 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SIN3AQ96ST3 1273 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 DUSP26Q9BV47 211 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 NUF2Q9BZD4 464 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 IKZF4Q9H2S9 585 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 PLEKHA4Q9H4M7 779 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZNF304Q9HCX3 659 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 MLXIPLQ9NP71 852 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC35C2Q9NQQ7 365 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 SH3GLB2Q9NR46 395 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 GIMAP4Q9NUV9 329 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 PACSIN3Q9UKS6 424 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 MYRFQ9Y2G1 1151 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 AAR2Q9Y312 384 aaKnown RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 MAGED1Q9Y5V3 778 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMEM131LA2VDJ0 1609 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 NUP155O75694 1391 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 METP08581 1390 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 PHLPP1O60346 1717 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 RGS12O14924 1447 aa3.36□□□□□ -1.87
TRAPPC11-205ENST00000506426 TRPM2O94759 1503 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 DIP2AQ14689 1571 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CFAP65Q6ZU64 1925 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 NRXN3Q9Y4C0 1643 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 A0A096LPK6 155 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 C17orf102A2RUQ5 167 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CDRT15L2A8MXV6 281 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 NPIPB11E5RHQ5 1161 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 NPIPB8E9PQR5 432 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 EBAG9O00559 213 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 MGST3O14880 152 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 MATN3O15232 486 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 HS6ST1O60243 411 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CSPG5O95196 566 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 GABRB1P18505 474 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CIITAP33076 1130 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC16A2P36021 539 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 NRIP1P48552 1158 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CENPAP49450 140 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 F2RL1P55085 397 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CLDN2P57739 230 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC18A2Q05940 514 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 DRAP1Q14919 205 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 PGM5Q15124 567 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 SYTL3Q4VX76 610 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 ALG10Q5BKT4 473 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 ALG10BQ5I7T1 473 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 EARS2Q5JPH6 523 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 PRAMEF17Q5VTA0 474 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 ISM2Q6H9L7 571 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 JADE1Q6IE81 842 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZNF813Q6ZN06 617 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 TDRPQ86YL5 185 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 LURAP1LQ8IV03 231 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 DHX40Q8IX18 779 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM185AQ8N0U4 392 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CADM3Q8N126 398 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZCCHC9Q8N567 271 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 DPP10Q8N608 796 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 NKAIN3Q8N8D7 197 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 POMGNT2Q8NAT1 580 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 AVL9Q8NBF6 648 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 RASSF8Q8NHQ8 419 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 GABPB2Q8TAK5 448 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 OSR1Q8TAX0 266 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 WIPF2Q8TF74 440 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 LARP4BQ92615 738 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 SARAFQ96BY9 339 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 PABPC5Q96DU9 382 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 CLMNQ96JQ2 1002 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMEM68Q96MH6 324 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 TTC14Q96N46 770 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 PRRX2Q99811 253 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 EFHD1Q9BUP0 239 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 RABEP2Q9H5N1 569 aa3.35□□□□□ -1.87
TRAPPC11-205ENST00000506426 MOV10Q9HCE1 1003 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms