RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 ZNF599Q96NL3 588 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 SLC46A1Q96NT5 459 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 PSKH2Q96QS6 385 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 CCDC3Q9BQI4 270 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 DPH1Q9BZG8 443 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 TRIM7Q9C029 511 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 CWC15Q9P013 229 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 GPR34Q9UPC5 381 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 SATB2Q9UPW6 733 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 PCDHGA8Q9Y5G5 932 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 ENTPD2Q9Y5L3 495 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 NBEAQ8NFP9 2946 aa12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 GOLGA4Q13439 2230 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-214ENST00000505746 CELSR3Q9NYQ7 3312 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 ATXN7O15265 892 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 PRKCGP05129 697 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 HOXC4P09017 264 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 ELFN1P0C7U0 828 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 NFKBIAP25963 317 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 KIAA1024LP59773 190 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 CXADRP78310 365 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 DPYSQ14117 519 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 NR1I3Q14994 352 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 FIGNQ5HY92 759 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 LIPIQ6XZB0 460 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 CYP4V2Q6ZWL3 525 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 BBS5Q8N3I7 341 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 ARL14Q8N4G2 192 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 NPWQ8N729 165 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 OR56A4Q8NGH8 313 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 WDR36Q8NI36 951 aaKnown RBP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 PCDH19Q8TAB3 1148 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 KCNE4Q8WWG9 221 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 CCDC97Q96F63 343 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 NAP1L5Q96NT1 182 aaPredicted RBP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 ISCUQ9H1K1 167 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 SYNDIG1Q9H7V2 258 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 ASCL3Q9NQ33 180 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 KCTD5Q9NXV2 234 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 SIRPGQ9P1W8 387 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 BZW2Q9Y6E2 419 aaKnown RBP12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 DGKBQ9Y6T7 804 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 ACACAQ13085 2346 aa12.12□□□□□ -0.47
PDLIM7-214ENST00000505746 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 CCDC187A0A096LP49 1063 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 TMX2-CTNND1H3BSU7 103 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 PDE2AO00408 941 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 TRAFD1O14545 582 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 TNFRSF10CO14798 259 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 CELA2BP08218 269 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 SKILP12757 684 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 HSPA9P38646 679 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 TMPRSS3P57727 454 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 TPM4P67936 248 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 SLC10A7Q0GE19 358 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 RALGDSQ12967 914 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 PIGHQ14442 188 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 ZNF235Q14590 738 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 ACOX1Q15067 660 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 DPYSL2Q16555 572 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 E4F1Q66K89 784 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 TMCO3Q6UWJ1 677 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 DPPA4Q7L190 304 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 KYQ8NBH2 561 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 PLA2G15Q8NCC3 412 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 NSMCE1Q8WV22 266 aa12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 FUBP1Q96AE4 644 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDLIM7-214ENST00000505746 DOCK9Q9BZ29 2069 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 ARID1BQ8NFD5 2236 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 NTN3O00634 580 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 KLK10O43240 276 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 SOCS5O75159 536 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 AMPD1P23109 780 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 IL1R2P27930 398 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 SERPINB6P35237 376 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 TRIM23P36406 574 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 C19orf57Q0VDD7 668 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 TCEA2Q15560 299 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 TSR1Q2NL82 804 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 SMTNL2Q2TAL5 461 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 TDRD12Q587J7 1177 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 CAVIN1Q6NZI2 390 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 PNCKQ6P2M8 343 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 POLNQ7Z5Q5 900 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 TAF8Q7Z7C8 310 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 PDCD6IPQ8WUM4 868 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 HSPH1Q92598 858 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 SYN2Q92777 582 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 CCDC74AQ96AQ1 378 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 PDXPQ96GD0 296 aa12.1□□□□□ -0.47
PDLIM7-214ENST00000505746 PRR11Q96HE9 360 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms