RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TMA16Q96EY4 203 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 UBXN10Q96LJ8 280 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 IL21Q9HBE4 155 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 GPAMQ9HCL2 828 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 CPSF2Q9P2I0 782 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 NUMBLQ9Y6R0 609 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 GOLGA8QA0A0J9YX86 632 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 GOLGA8OA6NCC3 632 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 GOLGA8NF8WBI6 632 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 CBX4O00257 560 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 HDAC3O15379 428 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 WISP3O95389 354 aaPredicted RBP17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 LRG1P02750 347 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 SBK3P0C264 359 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 IRF1P10914 325 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 CSF2RAP15509 400 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 HDCP19113 662 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 AVPR1AP37288 418 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 SCNN1BP51168 640 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 ZNF140P52738 457 aaPredicted RBP17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 NAA20P61599 178 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 AP1S1P61966 158 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 HTRA3P83110 453 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 PFKPQ01813 784 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 TECRLQ5HYJ1 363 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 MFN1Q8IWA4 741 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 TEX9Q8N6V9 391 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 OR52K2Q8NGK3 314 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 TRMOQ9BU70 441 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 EML4Q9HC35 981 aaKnown RBP17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 IGSF5Q9NSI5 407 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 PNPOQ9NVS9 261 aa17.33■□□□□ 0.37
TRAPPC11-204ENST00000505676 E2F8A0AVK6 867 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 MAGEC1O60732 1142 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 TBL1XO60907 577 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 GOT2P00505 430 aaKnown RBP17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 ADH1AP07327 375 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 LRRC26Q2I0M4 334 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 SEL1L3Q68CR1 1132 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 HEXDCQ8WVB3 486 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 CMTM5Q96DZ9 223 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 TBATAQ96M53 351 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 CCDC28BQ9BUN5 200 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 C2orf49Q9BVC5 232 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 IL23AQ9NPF7 189 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 WBP1LQ9NX94 342 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 PLXNA4Q9HCM2 1894 aa17.33■□□□□ 0.36
TRAPPC11-204ENST00000505676 C2orf71A6NGG8 1288 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 MATN2O00339 956 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 GSC2O15499 205 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 DLX3O60479 287 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZMPSTE24O75844 475 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 FGF18O76093 207 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 CD9P21926 228 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 FDXRP22570 491 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARSDP51689 593 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 STC1P52823 247 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ALDH18A1P54886 795 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 RPL26P61254 145 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 GALNT3Q14435 633 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 AARS2Q5JTZ9 985 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 RETSATQ6NUM9 610 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 NAPRTQ6XQN6 538 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 HTR3DQ70Z44 454 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 TMC7Q7Z402 723 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 GLT6D1Q7Z4J2 308 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 NECAB2Q7Z6G3 386 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 TTC7BQ86TV6 843 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 FIBCD1Q8N539 461 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ACDQ96AP0 544 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 RMDN1Q96DB5 314 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 DNAJC1Q96KC8 554 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 EBF4Q9BQW3 602 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 COMMD10Q9Y6G5 202 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 KIAA1671Q9BY89 1806 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 SOBPA7XYQ1 873 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 GREM1O60565 184 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 TMCC1O94876 653 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 LPOP22079 712 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 PMLP29590 882 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 CSNK1DP48730 415 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 HTRA4P83105 476 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARF5P84085 180 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 CDH18Q13634 790 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 RBM20Q5T481 1227 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 NCEH1Q6PIU2 408 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ACAD11Q709F0 780 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZNF781Q8N8C0 355 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 FAM13CQ8NE31 585 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 CDKN2AIPNLQ96HQ2 116 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ASB2Q96Q27 587 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 COG4Q9H9E3 785 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 SYTL2Q9HCH5 934 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ZNF334Q9HCZ1 680 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 LZTS1Q9Y250 596 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 RAI2Q9Y5P3 530 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 CPQQ9Y646 472 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ARL5AQ9Y689 179 aa17.32■□□□□ 0.36
TRAPPC11-204ENST00000505676 ANAPC1Q9H1A4 1944 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms