RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 DKK3Q9UBP4 350 aa5.9□□□□□ -1.46
GYPB-205ENST00000505583 HPCAL4Q9UM19 191 aa5.9□□□□□ -1.46
GYPB-205ENST00000505583 GPR34Q9UPC5 381 aa5.9□□□□□ -1.46
GYPB-205ENST00000505583 MFHAS1Q9Y4C4 1052 aa5.9□□□□□ -1.46
GYPB-205ENST00000505583 UNC13CQ8NB66 2214 aa5.9□□□□□ -1.47
GYPB-205ENST00000505583 ARHGEF17Q96PE2 2063 aaPredicted RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 SDK2Q58EX2 2172 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PRAMEF33A0A0G2JMD5 474 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 TTC24A2A3L6 582 aaPredicted RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 A8MX80 341 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 C9orf172C9J069 976 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PES1O00541 588 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 CCP110O43303 1012 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 CREB3O43889 395 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PRAMEF10O60809 474 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 RASGRP1O95267 797 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 IGSF6O95976 241 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 FUCA1P04066 466 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PCCBP05166 539 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 KRT3P12035 628 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 CTSEP14091 401 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ITGB6P18564 788 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 GPD1P21695 349 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 EPHB2P29323 1055 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 CCKBRP32239 447 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 SOX5P35711 763 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 MMP12P39900 470 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PEX5P50542 639 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ARSDP51689 593 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 INHBCP55103 352 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 GEMIN4P57678 1058 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 SRP54P61011 504 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 CYP4F2P78329 520 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ZFP36L1Q07352 338 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 NFATC3Q12968 1075 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 SERINC3Q13530 473 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 NFATC4Q14934 902 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PTPRRQ15256 657 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 KRT31Q15323 416 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ELOCQ15369 112 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 CA9Q16790 459 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 CLEC16AQ2KHT3 1053 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 INO80DQ53TQ3 878 aaPredicted RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 ESRP1Q6NXG1 681 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 SCYL2Q6P3W7 929 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 BRICD5Q6PL45 260 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 LVRNQ6Q4G3 990 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ARHGAP36Q6ZRI8 547 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 MON1BQ7L1V2 547 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 SLFN11Q7Z7L1 901 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ZFAND4Q86XD8 727 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ZNF354CQ86Y25 554 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PHF13Q86YI8 300 aaPredicted RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 JAMLQ86YT9 394 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 CCNJLQ8IV13 435 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 FAM114A1Q8IWE2 563 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 TP53INP2Q8IXH6 220 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 UMODL1-AS1Q8N2C9 162 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 FSTL5Q8N475 847 aaPredicted RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 TSEN2Q8NCE0 465 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 GPR156Q8NFN8 814 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 HTR3CQ8WXA8 447 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 EXTL1Q92935 676 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PMEPA1Q969W9 287 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 KCTD12Q96CX2 325 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 CELF6Q96J87 481 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 WDR92Q96MX6 357 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 GFM1Q96RP9 751 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 RBM15Q96T37 977 aaKnown RBP eCLIP5.89□□□□□ -1.47
GYPB-205ENST00000505583 SLC39A8Q9C0K1 460 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 TMEM168Q9H0V1 697 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 SEMA6CQ9H3T2 930 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 LRRN3Q9H3W5 708 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 SUV39H2Q9H5I1 410 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 CLMPQ9H6B4 373 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 LRRC19Q9H756 370 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 RDH14Q9HBH5 336 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 TMEM51Q9NW97 253 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 GPATCH2LQ9NWQ4 482 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ADAM22Q9P0K1 906 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 FOXJ2Q9P0K8 574 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PISDQ9UG56 409 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 FZD10Q9ULW2 581 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 DOLKQ9UPQ8 538 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 SIK3Q9Y2K2 1263 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 DAAM1Q9Y4D1 1078 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PCDHB3Q9Y5E6 796 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 PCDHGA7Q9Y5G6 932 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ST14Q9Y5Y6 855 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 RNF215Q9Y6U7 377 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ZFC3H1O60293 1989 aaKnown RBP5.89□□□□□ -1.47
GYPB-205ENST00000505583 PIEZO2Q9H5I5 2752 aa5.89□□□□□ -1.47
GYPB-205ENST00000505583 ZSCAN5CA6NGD5 496 aaPredicted RBP5.88□□□□□ -1.47
GYPB-205ENST00000505583 CAPN8A6NHC0 703 aa5.88□□□□□ -1.47
GYPB-205ENST00000505583 SIGLEC16A6NMB1 481 aa5.88□□□□□ -1.47
GYPB-205ENST00000505583 WASH4PA8MWX3 477 aa5.88□□□□□ -1.47
GYPB-205ENST00000505583 B4DGG1 531 aa5.88□□□□□ -1.47
GYPB-205ENST00000505583 B4GAT1O43505 415 aa5.88□□□□□ -1.47
GYPB-205ENST00000505583 PRAMEF11O60813 436 aa5.88□□□□□ -1.47
GYPB-205ENST00000505583 RECQL5O94762 991 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms