RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SLC2A13Q96QE2 648 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 MIS12Q9H081 205 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 ZNF768Q9H5H4 540 aaKnown RBP6.07□□□□□ -1.44
GYPB-204ENST00000504951 CYP4F12Q9HCS2 524 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 MLXIPLQ9NP71 852 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 RRN3Q9NYV6 651 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 ZNF212Q9UDV6 495 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 MFHAS1Q9Y4C4 1052 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 B3GALT1Q9Y5Z6 326 aa6.07□□□□□ -1.44
GYPB-204ENST00000504951 SETD2Q9BYW2 2564 aaPredicted RBP6.07□□□□□ -1.44
GYPB-204ENST00000504951 ITPR3Q14573 2671 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 SHANK1Q9Y566 2161 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 K7ERQ8 282 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 M0QYV0 167 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 SNAP91O60641 907 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 SORBS2O94875 1100 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 POP4O95707 220 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 CLDN1O95832 211 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 CD160O95971 181 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 MOCS2O96007 188 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 GSRP00390 522 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 LDLRP01130 860 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 CELA2BP08218 269 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 TCN2P20062 427 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 BMP6P22004 513 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 GNLYP22749 145 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 RRM1P23921 792 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 CD1CP29017 333 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 OAS2P29728 719 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 TRIM23P36406 574 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 STAT1P42224 750 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 ABL2P42684 1182 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 FMO5P49326 533 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 SERPINH1P50454 418 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 IRAK1P51617 712 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 CCNHP51946 323 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 COPB1P53618 953 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 GEMIN4P57678 1058 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 SRP54P61011 504 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 GPLD1P80108 840 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 CDK17Q00537 523 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 MC2RQ01718 297 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 MTM1Q13496 603 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 RAPGEF1Q13905 1077 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 NFATC4Q14934 902 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 LRRC14Q15048 493 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 TAF5Q15542 800 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 RNFT1Q5M7Z0 435 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 BRMS1LQ5PSV4 323 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 ARTNQ5T4W7 220 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 ZNF658Q5TYW1 1059 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 ISM2Q6H9L7 571 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 TMEM71Q6P5X7 295 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 ASB18Q6ZVZ8 466 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 PARS2Q7L3T8 475 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 RRAGAQ7L523 313 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 CIR1Q86X95 450 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 IRF2BP1Q8IU81 584 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 HID1Q8IV36 788 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 ARHGEF19Q8IW93 802 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 FAM114A1Q8IWE2 563 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 FMR1NBQ8N0W7 255 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 KIAA1524Q8TCG1 905 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 NT5C3BQ969T7 300 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 RTP4Q96DX8 246 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 PGAP3Q96FM1 320 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 KREMEN1Q96MU8 473 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 WDR92Q96MX6 357 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 KCTD15Q96SI1 283 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 APOOQ9BUR5 198 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 INTS2Q9H0H0 1204 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 MUC3BQ9H195 1237 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 GPN2Q9H9Y4 310 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 ACP6Q9NPH0 428 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 MBNL1Q9NR56 388 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 ENAMQ9NRM1 1142 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 ARHGEF38Q9NXL2 777 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 ARMCX3Q9UH62 379 aaPredicted RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 PHTF1Q9UMS5 762 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 TP53TG5Q9Y2B4 290 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 PCDHB4Q9Y5E5 795 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 PCDHGA9Q9Y5G4 932 aaKnown RBP6.06□□□□□ -1.44
GYPB-204ENST00000504951 PCDHGA6Q9Y5G7 932 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 HS3ST4Q9Y661 456 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 POLEQ07864 2286 aa6.06□□□□□ -1.44
GYPB-204ENST00000504951 LOC101059948A0A1B0GTJ6 334 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 HEATR9A2RTY3 570 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 GOLGA6L3A6NEY3 463 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 NEMP1O14524 444 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 SLC16A3O15427 465 aaKnown RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 HNRNPRO43390 633 aaKnown RBP6.05□□□□□ -1.44
GYPB-204ENST00000504951 DUX1O43812 170 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 DLGAP3O95886 979 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 RNF224P0DH78 156 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 THRAP10827 490 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 KELP23276 732 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 CSTF2P33240 577 aaKnown RBP eCLIP6.05□□□□□ -1.44
GYPB-204ENST00000504951 ETFBP38117 255 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 UQCRFS1P47985 274 aa6.05□□□□□ -1.44
GYPB-204ENST00000504951 LEPRP48357 1165 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms