RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 NEMP2A6NFY4 417 aa15.05■□□□□ -0
SNF8-203ENST00000504000 HAS3O00219 553 aa15.05■□□□□ -0
SNF8-203ENST00000504000 IRAK2O43187 625 aa15.05■□□□□ -0
SNF8-203ENST00000504000 SLC7A4O43246 635 aa15.05■□□□□ -0
SNF8-203ENST00000504000 HOXB8P17481 243 aaPredicted RBP15.05■□□□□ -0
SNF8-203ENST00000504000 KCNA5P22460 613 aa15.05■□□□□ -0
SNF8-203ENST00000504000 ATXN3P54252 364 aaPredicted RBP15.05■□□□□ -0
SNF8-203ENST00000504000 EMP3P54852 163 aa15.05■□□□□ -0
SNF8-203ENST00000504000 STX1BP61266 288 aa15.05■□□□□ -0
SNF8-203ENST00000504000 BNIP2Q12982 314 aa15.05■□□□□ -0
SNF8-203ENST00000504000 GRB14Q14449 540 aa15.05■□□□□ -0
SNF8-203ENST00000504000 MTX3Q5HYI7 312 aa15.05■□□□□ -0
SNF8-203ENST00000504000 ARHGAP36Q6ZRI8 547 aa15.05■□□□□ -0
SNF8-203ENST00000504000 CAMK1DQ8IU85 385 aa15.05■□□□□ -0
SNF8-203ENST00000504000 CROCCP3Q8IVE0 287 aa15.05■□□□□ -0
SNF8-203ENST00000504000 CLYBLQ8N0X4 340 aa15.05■□□□□ -0
SNF8-203ENST00000504000 MINDY1Q8N5J2 469 aa15.05■□□□□ -0
SNF8-203ENST00000504000 RNF34Q969K3 372 aa15.05■□□□□ -0
SNF8-203ENST00000504000 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.05■□□□□ -0
SNF8-203ENST00000504000 SLC45A3Q96JT2 553 aa15.05■□□□□ -0
SNF8-203ENST00000504000 OLFM1Q99784 485 aa15.05■□□□□ -0
SNF8-203ENST00000504000 SLC29A1Q99808 456 aa15.05■□□□□ -0
SNF8-203ENST00000504000 SLC39A8Q9C0K1 460 aa15.05■□□□□ -0
SNF8-203ENST00000504000 SLC25A51Q9H1U9 297 aa15.05■□□□□ -0
SNF8-203ENST00000504000 CNOT6Q9ULM6 557 aaKnown RBP15.05■□□□□ -0
SNF8-203ENST00000504000 NDUFAF1Q9Y375 327 aa15.05■□□□□ -0
SNF8-203ENST00000504000 WASH4PA8MWX3 477 aa15.04■□□□□ -0
SNF8-203ENST00000504000 HLA-DQB2P05538 268 aa15.04■□□□□ -0
SNF8-203ENST00000504000 HSD17B1P14061 328 aa15.04■□□□□ -0
SNF8-203ENST00000504000 GPX3P22352 226 aa15.04■□□□□ -0
SNF8-203ENST00000504000 RPL9P32969 192 aaKnown RBP15.04■□□□□ -0
SNF8-203ENST00000504000 ATP6V0D1P61421 351 aa15.04■□□□□ -0
SNF8-203ENST00000504000 PRKCQQ04759 706 aa15.04■□□□□ -0
SNF8-203ENST00000504000 ZNF678Q5SXM1 525 aa15.04■□□□□ -0
SNF8-203ENST00000504000 RBM20Q5T481 1227 aaKnown RBP15.04■□□□□ -0
SNF8-203ENST00000504000 ARTNQ5T4W7 220 aa15.04■□□□□ -0
SNF8-203ENST00000504000 RWDD4Q6NW29 188 aaKnown RBP15.04■□□□□ -0
SNF8-203ENST00000504000 FAM171BQ6P995 826 aa15.04■□□□□ -0
SNF8-203ENST00000504000 KDELC1Q6UW63 502 aa15.04■□□□□ -0
SNF8-203ENST00000504000 CYHR1Q6ZMK1 362 aa15.04■□□□□ -0
SNF8-203ENST00000504000 DPP9Q86TI2 863 aa15.04■□□□□ -0
SNF8-203ENST00000504000 TSPEARQ8WU66 669 aa15.04■□□□□ -0
SNF8-203ENST00000504000 SGF29Q96ES7 293 aa15.04■□□□□ -0
SNF8-203ENST00000504000 DNAJC1Q96KC8 554 aaKnown RBP15.04■□□□□ -0
SNF8-203ENST00000504000 SEMA6AQ9H2E6 1030 aa15.04■□□□□ -0
SNF8-203ENST00000504000 MUC13Q9H3R2 512 aa15.04■□□□□ -0
SNF8-203ENST00000504000 NOL11Q9H8H0 719 aaKnown RBP15.04■□□□□ -0
SNF8-203ENST00000504000 PREBQ9HCU5 417 aa15.04■□□□□ -0
SNF8-203ENST00000504000 TNFRSF12AQ9NP84 129 aa15.04■□□□□ -0
SNF8-203ENST00000504000 RBM22Q9NW64 420 aaKnown RBP eCLIP15.04■□□□□ -0
SNF8-203ENST00000504000 VWA7Q9Y334 891 aa15.04■□□□□ -0
SNF8-203ENST00000504000 SRCAPQ6ZRS2 3230 aa15.04■□□□□ -0
SNF8-203ENST00000504000 A0A087WXM4 84 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MYOCOSA0A1B0GUC4 107 aa15.03■□□□□ -0
SNF8-203ENST00000504000 FOXM1Q08050 763 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MFSD10Q14728 455 aa15.03■□□□□ -0
SNF8-203ENST00000504000 CYTH1Q15438 398 aa15.03■□□□□ -0
SNF8-203ENST00000504000 PPP1R3AQ16821 1122 aa15.03■□□□□ -0
SNF8-203ENST00000504000 UGT3A2Q3SY77 523 aa15.03■□□□□ -0
SNF8-203ENST00000504000 HECTD2Q5U5R9 776 aa15.03■□□□□ -0
SNF8-203ENST00000504000 LCN8Q6JVE9 175 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MOB2Q70IA6 237 aa15.03■□□□□ -0
SNF8-203ENST00000504000 CILP2Q8IUL8 1156 aa15.03■□□□□ -0
SNF8-203ENST00000504000 FUNDC1Q8IVP5 155 aa15.03■□□□□ -0
SNF8-203ENST00000504000 COLGALT2Q8IYK4 626 aa15.03■□□□□ -0
SNF8-203ENST00000504000 TNIP2Q8NFZ5 429 aa15.03■□□□□ -0
SNF8-203ENST00000504000 FAM210AQ96ND0 272 aa15.03■□□□□ -0
SNF8-203ENST00000504000 ACBD6Q9BR61 282 aa15.03■□□□□ -0
SNF8-203ENST00000504000 ABCC13Q9NSE7 274 aa15.03■□□□□ -0
SNF8-203ENST00000504000 TANC1Q9C0D5 1861 aa15.03■□□□□ -0
SNF8-203ENST00000504000 CSPG5O95196 566 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MATN4O95460 622 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MYF6P23409 242 aa15.03■□□□□ -0
SNF8-203ENST00000504000 PAX3P23760 479 aa15.03■□□□□ -0
SNF8-203ENST00000504000 CCR1P32246 355 aa15.03■□□□□ -0
SNF8-203ENST00000504000 TTKP33981 857 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MRPL19P49406 292 aaKnown RBP15.03■□□□□ -0
SNF8-203ENST00000504000 SERPINH1P50454 418 aaKnown RBP15.03■□□□□ -0
SNF8-203ENST00000504000 SLC7A2P52569 658 aa15.03■□□□□ -0
SNF8-203ENST00000504000 NME5P56597 212 aa15.03■□□□□ -0
SNF8-203ENST00000504000 NUP107P57740 925 aa15.03■□□□□ -0
SNF8-203ENST00000504000 HERVK_113P63132 956 aa15.03■□□□□ -0
SNF8-203ENST00000504000 TNK2Q07912 1038 aa15.03■□□□□ -0
SNF8-203ENST00000504000 RALGDSQ12967 914 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MAP7D1Q3KQU3 841 aa15.03■□□□□ -0
SNF8-203ENST00000504000 LDLRAD1Q5T700 205 aa15.03■□□□□ -0
SNF8-203ENST00000504000 TWF2Q6IBS0 349 aaKnown RBP15.03■□□□□ -0
SNF8-203ENST00000504000 ISCA2Q86U28 154 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MYO1HQ8N1T3 1032 aa15.03■□□□□ -0
SNF8-203ENST00000504000 LRRC43Q8N309 656 aa15.03■□□□□ -0
SNF8-203ENST00000504000 FIBCD1Q8N539 461 aa15.03■□□□□ -0
SNF8-203ENST00000504000 RTL3Q8N8U3 475 aaKnown RBP15.03■□□□□ -0
SNF8-203ENST00000504000 PEX13Q92968 403 aa15.03■□□□□ -0
SNF8-203ENST00000504000 C19orf60Q96EN9 201 aa15.03■□□□□ -0
SNF8-203ENST00000504000 FEM1CQ96JP0 617 aa15.03■□□□□ -0
SNF8-203ENST00000504000 ZFP42Q96MM3 310 aa15.03■□□□□ -0
SNF8-203ENST00000504000 CIB1Q99828 191 aa15.03■□□□□ -0
SNF8-203ENST00000504000 ERVK-6Q9BXR3 956 aa15.03■□□□□ -0
SNF8-203ENST00000504000 MFSD1Q9H3U5 465 aa15.03■□□□□ -0
SNF8-203ENST00000504000 CYP4F12Q9HCS2 524 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms