RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MKLN1Q9UL63 735 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TBX20Q9UMR3 447 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 VPS4AQ9UN37 437 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 KCNJ14Q9UNX9 436 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DOLKQ9UPQ8 538 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 POMPQ9Y244 141 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NDUFB9Q9Y6M9 179 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 RGSL1A5PLK6 1076 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 AQP12BA6NM10 295 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CLCA1A8K7I4 914 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TRDMT1O14717 391 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 OXSR1O95747 527 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 JUNP05412 331 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BMP3P12645 472 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 IL10P22301 178 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 FOXN2P32314 431 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ATP5OP48047 213 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 EPHB1P54762 984 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TAP1Q03518 808 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SLC12A1Q13621 1099 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ADGRE1Q14246 886 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PPP2R5DQ14738 602 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TRADDQ15628 312 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PTPN21Q16825 1174 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 INAVAQ3KP66 663 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SAMD4BQ5PRF9 694 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CELF3Q5SZQ8 465 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 INTS11Q5TA45 600 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DCAF15Q66K64 600 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 KDM4DQ6B0I6 523 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TAS2R42Q7RTR8 314 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TMC7Q7Z402 723 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 C11orf96Q7Z7L8 435 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CAND1Q86VP6 1230 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NUDCD3Q8IVD9 361 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CHERPQ8IWX8 916 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 AQP12AQ8IXF9 295 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PALM2Q8IXS6 379 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CADM3Q8N126 398 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TCAIMQ8N3R3 496 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 RP9Q8TA86 221 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HERVK_113Q902F9 699 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SEPT8Q92599 483 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HPS1Q92902 700 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SDCCAG3Q96C92 435 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TUBGCP3Q96CW5 907 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ARHGEF26Q96DR7 871 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PTCD3Q96EY7 689 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DCUN1D1Q96GG9 259 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF419Q96HQ0 510 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BTBD6Q96KE9 485 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TNIP3Q96KP6 325 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 B3GALT6Q96L58 329 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SIGLEC10Q96LC7 697 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF599Q96NL3 588 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ANKRD60Q9BZ19 345 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MKRN2Q9H000 416 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NEUROG2Q9H2A3 272 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SYTL2Q9HCH5 934 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NPHS2Q9NP85 383 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TRNAU1APQ9NX07 287 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SLC39A1Q9NY26 324 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 USE1Q9NZ43 259 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 EMC3Q9P0I2 261 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 GCNT4Q9P109 453 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DCTN4Q9UJW0 460 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 AP3M1Q9Y2T2 418 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PCDHB13Q9Y5F0 798 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DCDC2CA8MYV0 355 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TAF4O00268 1085 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MOSPD3O75425 235 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TSPAN12O95859 305 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DARSP14868 501 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ETS2P15036 469 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MX2P20592 715 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 RRM2P31350 389 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CA8P35219 290 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BTDP43251 543 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 GYG1P46976 350 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HLCSP50747 726 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SLC5A3P53794 718 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 OTUD4Q01804 1114 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ACAP2Q15057 778 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TRIP4Q15650 581 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HIF1AQ16665 826 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ARHGAP44Q17R89 818 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MFSD14BQ5SR56 506 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZFYVE27Q5T4F4 411 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DCAF12L1Q5VU92 463 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SPOPLQ6IQ16 392 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF544Q6NX49 715 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MAEAQ7L5Y9 396 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PLCZ1Q86YW0 608 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PGBD4Q96DM1 585 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 P2RY11Q96G91 374 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 WNK4Q96J92 1243 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF597Q96LX8 424 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SEPHS2Q99611 448 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HEPHQ9BQS7 1158 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 GPR62Q9BZJ7 368 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms