RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 GLP2RO95838 553 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 APOA4P06727 396 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 PIRTP0C851 137 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 IRX4P78413 519 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 RBM23Q86U06 439 aaKnown RBP22.09■■□□□ 1.13
PTPN13-205ENST00000502971 TMEM25Q86YD3 366 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 PLD6Q8N2A8 252 aaKnown RBP22.09■■□□□ 1.13
PTPN13-205ENST00000502971 IRF7Q92985 503 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 TIFAQ96CG3 184 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 ELMO2Q96JJ3 720 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 C7orf26Q96N11 449 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 HACD3Q9P035 362 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 INTS6Q9UL03 887 aaKnown RBP22.09■■□□□ 1.13
PTPN13-205ENST00000502971 GOT2P00505 430 aaKnown RBP22.08■■□□□ 1.12
PTPN13-205ENST00000502971 ALDH3A1P30838 453 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 SLC12A2P55011 1212 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 IRF9Q00978 393 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 PITRM1Q5JRX3 1037 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 ATXN7L2Q5T6C5 722 aaPredicted RBP22.08■■□□□ 1.12
PTPN13-205ENST00000502971 MRNIPQ6NTE8 343 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 CNSTQ6PJW8 725 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 MFSD6LQ8IWD5 586 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 GPATCH11Q8N954 259 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 CDKN2AIPNLQ96HQ2 116 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 TRIM55Q9BYV6 548 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 PIDD1Q9HB75 910 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.08■■□□□ 1.12
PTPN13-205ENST00000502971 COPG2Q9UBF2 871 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 MID2Q9UJV3 735 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 ACOT9Q9Y305 439 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 MRPS23Q9Y3D9 190 aaKnown RBP22.08■■□□□ 1.12
PTPN13-205ENST00000502971 USH1CQ9Y6N9 552 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 CHD9Q3L8U1 2897 aa22.08■■□□□ 1.12
PTPN13-205ENST00000502971 DOCK6Q96HP0 2047 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 A0A087X1B8 175 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 CCDC162PA2VCL2 907 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 CCL22O00626 93 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 SMAD6O43541 496 aaKnown RBP22.07■■□□□ 1.12
PTPN13-205ENST00000502971 PAPLNO95428 1278 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 SLC35E2BP0CK96 405 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 OGNP20774 298 aaKnown RBP22.07■■□□□ 1.12
PTPN13-205ENST00000502971 SAT1P21673 171 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 BST1Q10588 318 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 ADGRD2Q7Z7M1 963 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 MDGA1Q8NFP4 955 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 OR13C4Q8NGS5 318 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 PDCD6IPQ8WUM4 868 aaKnown RBP22.07■■□□□ 1.12
PTPN13-205ENST00000502971 SCG3Q8WXD2 468 aaKnown RBP22.07■■□□□ 1.12
PTPN13-205ENST00000502971 ZSWIM3Q96MP5 696 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 BBS2Q9BXC9 721 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 NMRAL1Q9HBL8 299 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 SPHK2Q9NRA0 654 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 ZNF358Q9NW07 568 aa22.07■■□□□ 1.12
PTPN13-205ENST00000502971 SLC9A3R1O14745 358 aaPredicted RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 CD3EAPO15446 510 aaKnown RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 PHGDHO43175 533 aaKnown RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 IGSF6O95976 241 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 S1PR4O95977 384 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 CPA3P15088 417 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 CEBPBP17676 345 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 LPOP22079 712 aaPredicted RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 HLA-FP30511 346 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 GRIA4P48058 902 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 RPL26P61254 145 aaKnown RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 STX3Q13277 289 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 PCLAFQ15004 111 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 LACTB2Q53H82 288 aaPredicted RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 ARMC12Q5T9G4 340 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 SDCCAG8Q86SQ7 713 aaPredicted RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 ARID3BQ8IVW6 561 aaPredicted RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 KIAA1958Q8N8K9 716 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 OR4L1Q8NH43 312 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 PPP1R14CQ8TAE6 165 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 C10orf82Q8WW14 230 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 TSPAN17Q96FV3 270 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 OMDQ99983 421 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 C1QTNF1Q9BXJ1 281 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 TLE6Q9H808 572 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 CATSPERZQ9NTU4 200 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 CORO1CQ9ULV4 474 aaPredicted RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 RPL26L1Q9UNX3 145 aaKnown RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 CHD7Q9P2D1 2997 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 OR51F1A6NGY5 319 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 NEDD8-MDP1E9PL57 170 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 BUD23O43709 281 aaKnown RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 SNNO75324 88 aaPredicted RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 WEE1P30291 646 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 CORO7P57737 925 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 TAS2R39P59534 338 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 DMC1Q14565 340 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 PTPRCAPQ14761 206 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 DUSP6Q16828 381 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 LRIT3Q3SXY7 679 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 MBLAC2Q68D91 279 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 AFTPHQ6ULP2 937 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 CCDC91Q7Z6B0 441 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 RDH11Q8TC12 318 aa22.06■■□□□ 1.12
PTPN13-205ENST00000502971 SMG7Q92540 1137 aaKnown RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 ISG20Q96AZ6 181 aaKnown RBP22.06■■□□□ 1.12
PTPN13-205ENST00000502971 TM6SF2Q9BZW4 377 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms