RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 DQX1Q8TE96 717 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PDCD6IPQ8WUM4 868 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 JPH3Q8WXH2 748 aaPredicted RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 KCTD13Q8WZ19 329 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PTPRN2Q92932 1015 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 SNX21Q969T3 373 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 TTC17Q96AE7 1141 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 TCTN2Q96GX1 697 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 LMLNQ96KR4 655 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 NT5C1BQ96P26 610 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ZSWIM1Q9BR11 485 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 UNKQ9C0B0 810 aaKnown RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 FBRSQ9HAH7 460 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 CNGB3Q9NQW8 809 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ARHGAP20Q9P2F6 1191 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 GPN3Q9UHW5 284 aaPredicted RBP5.66□□□□□ -1.5
SPTA1-209ENST00000498708 STOML2Q9UJZ1 356 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PRDM4Q9UKN5 801 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ITGB1BP2Q9UKP3 347 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 VPS4AQ9UN37 437 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 ZDHHC9Q9Y397 364 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 DAAM1Q9Y4D1 1078 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PCSK5Q92824 1860 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 VPS13CQ709C8 3753 aa5.66□□□□□ -1.5
SPTA1-209ENST00000498708 PRAMEF33A0A0G2JMD5 474 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 EDDM13A0A1B0GTR0 161 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 NVLO15381 856 aaKnown RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 PRAMEF10O60809 474 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 IGLV3-27P01718 113 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 APOEP02649 317 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 SRPRAP08240 638 aaKnown RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 KRT5P13647 590 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ZNF18P17022 549 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 GOT1P17174 413 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ITIH1P19827 911 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 FUT4P22083 530 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 NNMTP40261 264 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ETV5P41161 510 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 FMO5P49326 533 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ADPRHP54922 357 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ECT2LQ008S8 904 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 KLRB1Q12918 225 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 STAT4Q14765 748 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 IFI16Q16666 785 aaKnown RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ZNF542PQ5EBM4 170 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 MPP7Q5T2T1 576 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 NAPEPLDQ6IQ20 393 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 KLHL10Q6JEL2 608 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 MSANTD2Q6P1R3 559 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 DENND1BQ6P3S1 775 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 RAB11FIP2Q7L804 512 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ATG4DQ86TL0 474 aaPredicted RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 PRPF39Q86UA1 669 aaKnown RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 IQCHQ86VS3 1027 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 HEATR4Q86WZ0 1026 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 CREBRFQ8IUR6 639 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 PLD6Q8N2A8 252 aaKnown RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 SLC35F5Q8WV83 523 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 IRGQQ8WZA9 623 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 RNF34Q969K3 372 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 SLC35C1Q96A29 364 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 SERPINB11Q96P15 392 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 DDX50Q9BQ39 737 aaKnown RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 GTPBP4Q9BZE4 634 aaKnown RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 EPB41L5Q9HCM4 733 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 PREBQ9HCU5 417 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 SSU72Q9NP77 194 aaKnown RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 FZD3Q9NPG1 666 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ACP6Q9NPH0 428 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 KLHL11Q9NVR0 708 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 NLGN3Q9NZ94 848 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 FOXJ2Q9P0K8 574 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 SEPT10Q9P0V9 454 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ARMCX3Q9UH62 379 aaPredicted RBP5.65□□□□□ -1.5
SPTA1-209ENST00000498708 SARDHQ9UL12 918 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 KIAA1257Q9ULG3 409 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 SCML1Q9UN30 329 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 COQ4Q9Y3A0 265 aa5.65□□□□□ -1.5
SPTA1-209ENST00000498708 ARHGAP10A1A4S6 786 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 TARSL2A2RTX5 802 aaKnown RBP5.64□□□□□ -1.51
SPTA1-209ENST00000498708 EME2A4GXA9 379 aaPredicted RBP5.64□□□□□ -1.51
SPTA1-209ENST00000498708 F5H5T6 163 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 SCAMP1O15126 338 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 MUSKO15146 869 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 SLC16A3O15427 465 aaKnown RBP5.64□□□□□ -1.51
SPTA1-209ENST00000498708 SLC31A1O15431 190 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 IRAK2O43187 625 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 LATO43561 262 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 TCEA3O75764 348 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 GRAP2O75791 330 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 LETM1O95202 739 aaPredicted RBP5.64□□□□□ -1.51
SPTA1-209ENST00000498708 TRUB2O95900 331 aaKnown RBP5.64□□□□□ -1.51
SPTA1-209ENST00000498708 PAEPP09466 180 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 ALPPL2P10696 532 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 PRLRP16471 622 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 C5AR1P21730 350 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 TBXAS1P24557 533 aaPredicted RBP5.64□□□□□ -1.51
SPTA1-209ENST00000498708 ARNTP27540 789 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 DRD3P35462 400 aa5.64□□□□□ -1.51
SPTA1-209ENST00000498708 USP8P40818 1118 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms