RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 AGAP3Q96P47 875 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 QKIQ96PU8 341 aaKnown RBP eCLIP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 HAPLN3Q96S86 360 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 CDK5RAP1Q96SZ6 601 aaKnown RBP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 APOL2Q9BQE5 337 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 SLC46A2Q9BY10 475 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 ZYG11BQ9C0D3 744 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 KLC2Q9H0B6 622 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 PRDM12Q9H4Q4 367 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 CATSPERBQ9H7T0 1116 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 SAYSD1Q9NPB0 183 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 PLK2Q9NYY3 685 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 BCCIPQ9P287 314 aaKnown RBP eCLIP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 KLHL8Q9P2G9 620 aaPredicted RBP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 UXTQ9UBK9 157 aaPredicted RBP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 MTRF1LQ9UGC7 380 aaKnown RBP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 AGO1Q9UL18 857 aaKnown RBP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 LZTS1Q9Y250 596 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 CCL26Q9Y258 94 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 HBS1LQ9Y450 684 aaKnown RBP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF451Q9Y4E5 1061 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 HCFC2Q9Y5Z7 792 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 ACTL7AQ9Y615 435 aa4.86□□□□□ -1.63
CMSS1-209ENST00000497345 ZFP37Q9Y6Q3 630 aaPredicted RBP4.86□□□□□ -1.63
CMSS1-209ENST00000497345 SHROOM3Q8TF72 1996 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 DOCK6Q96HP0 2047 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 TLDC2A0PJX2 215 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 BCLAF3A2AJT9 711 aaKnown RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 RASA4BC9J798 803 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 C5orf67F2Z3F1 127 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 H0Y626 953 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 J3KR12 359 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 LEFTY2O00292 366 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 DNALI1O14645 258 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 PPP1R12AO14974 1030 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 POLR3GO15318 223 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 RASA4O43374 803 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 USP12O75317 370 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 AVILO75366 819 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 METTL18O95568 372 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ACSL3O95573 720 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 OAS1P00973 400 aaKnown RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 TUBBP07437 444 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 APRTP07741 180 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 CEBPBP17676 345 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 SP100P23497 879 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 PSMB4P28070 264 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ECHS1P30084 290 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 CDC25CP30307 473 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 OR1E1P30953 314 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ACVRL1P37023 503 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 AVPR1AP37288 418 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 HCAR3P49019 387 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 NR2C2P49116 596 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 KPNA1P52294 538 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 AIF1P55008 147 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 COG7P83436 770 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ZXDBP98169 803 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 UBE3AQ05086 875 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 IFFO1Q0D2I5 559 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 PDIA2Q13087 525 aaKnown RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ZBTB17Q13105 803 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF177Q13360 481 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 POLD3Q15054 466 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 PAFAH1B3Q15102 231 aaKnown RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 DUSP6Q16828 381 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 PLEKHN1Q494U1 663 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 PABPC1LQ4VXU2 614 aaKnown RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ARHGAP15Q53QZ3 475 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 FAM133BQ5BKY9 247 aaKnown RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 TCEAL5Q5H9L2 206 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ANKRD20A2Q5SQ80 823 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 FNBP1LQ5T0N5 605 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 CFAP58Q5T655 872 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ANKRD20A1Q5TYW2 823 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ANKRD20A3Q5VUR7 823 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 RNF219Q5W0B1 726 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 NUGGCQ68CJ6 796 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 DENND2CQ68D51 928 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 IL31Q6EBC2 164 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 PAQR3Q6TCH7 311 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 GET4Q7L5D6 327 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 OTOP3Q7RTS5 596 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 TMC8Q8IU68 726 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ARHGAP12Q8IWW6 846 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 BBS7Q8IWZ6 715 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 CCDC13Q8IYE1 715 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ZNF567Q8N184 647 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 RTL3Q8N8U3 475 aaKnown RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 VN1R2Q8NFZ6 395 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ITFG1Q8TB96 612 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 SH3RF2Q8TEC5 729 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 DDI1Q8WTU0 396 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 HTR3CQ8WXA8 447 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 OVCA2Q8WZ82 227 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ART4Q93070 314 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 PABPC5Q96DU9 382 aaKnown RBP4.85□□□□□ -1.63
CMSS1-209ENST00000497345 ERLEC1Q96DZ1 483 aa4.85□□□□□ -1.63
CMSS1-209ENST00000497345 HMCESQ96FZ2 354 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms