RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 FAM153CQ494X1 144 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 ERN2Q76MJ5 926 aaKnown RBP10.98□□□□□ -0.65
CCDC142-209ENST00000497232 DSG4Q86SJ6 1040 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 LINC00523Q86TU6 105 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 LPCAT1Q8NF37 534 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 UBXN4Q92575 508 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 RANBP9Q96S59 729 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 PARD6BQ9BYG5 372 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 FRMD8Q9BZ67 464 aaPredicted RBP10.98□□□□□ -0.65
CCDC142-209ENST00000497232 MAGEE1Q9HCI5 957 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 XAB2Q9HCS7 855 aaKnown RBP10.98□□□□□ -0.65
CCDC142-209ENST00000497232 PCDH12Q9NPG4 1184 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 PIH1D1Q9NWS0 290 aaKnown RBP10.98□□□□□ -0.65
CCDC142-209ENST00000497232 GGT7Q9UJ14 662 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 FADS3Q9Y5Q0 445 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 TEX264Q9Y6I9 313 aa10.98□□□□□ -0.65
CCDC142-209ENST00000497232 PLXND1Q9Y4D7 1925 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 EML5Q05BV3 1969 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 LRRK1Q38SD2 2015 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 GOLGA6CA6NDK9 693 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 GOLGA6BA6NDN3 693 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 C1QTNF3-AMACRE9PGA6 284 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 KPNA3O00505 521 aaPredicted RBP10.97□□□□□ -0.65
CCDC142-209ENST00000497232 AP1G1O43747 822 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 BANF1O75531 89 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 C1QAP02745 245 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 GOLGA6DP0CG33 693 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 TPH1P17752 444 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 SUOXP51687 545 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 CREB5Q02930 508 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 PTSQ03393 145 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 ACVR1Q04771 509 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 DHX9Q08211 1270 aaKnown RBP10.97□□□□□ -0.65
CCDC142-209ENST00000497232 MTM1Q13496 603 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 FASTKD3Q14CZ7 662 aaKnown RBP10.97□□□□□ -0.65
CCDC142-209ENST00000497232 ELF2Q15723 593 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 POM121L1PQ3SYA9 428 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 TMEM52BQ4KMG9 183 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 UBAP2Q5T6F2 1119 aaKnown RBP10.97□□□□□ -0.65
CCDC142-209ENST00000497232 FAM46CQ5VWP2 391 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 ARMC3Q5W041 872 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 CRTC1Q6UUV9 634 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 USP30Q70CQ3 517 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 DPPA4Q7L190 304 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 TMC3Q7Z5M5 1100 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 TSPAN33Q86UF1 283 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 SLC25A41Q8N5S1 370 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 NELL1Q92832 810 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 ZNF778Q96MU6 729 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 HHIPQ96QV1 700 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 TRIM56Q9BRZ2 755 aaKnown RBP10.97□□□□□ -0.65
CCDC142-209ENST00000497232 KIFC1Q9BW19 673 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 FSD1LQ9BXM9 530 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 COL25A1Q9BXS0 654 aaPredicted RBP10.97□□□□□ -0.65
CCDC142-209ENST00000497232 ADGRE3Q9BY15 652 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 FOXP3Q9BZS1 431 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 EPB41L4BQ9H329 900 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 GOLGA6AQ9NYA3 693 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 B4GALT6Q9UBX8 382 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 NFU1Q9UMS0 254 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 SCML1Q9UN30 329 aa10.97□□□□□ -0.65
CCDC142-209ENST00000497232 ZNF318Q5VUA4 2279 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 KMT2EQ8IZD2 1858 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 A0A1W2PP55 124 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 E7EVH7 732 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 GAPDHSO14556 408 aaPredicted RBP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 NDC80O14777 642 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 EIF3HO15372 352 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 SLC7A4O43246 635 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 PLRG1O43660 514 aaKnown RBP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 RNASEH1O60930 286 aaKnown RBP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 SLC34A2O95436 690 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 PIRTP0C851 137 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 CTPS1P17812 591 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 CA4P22748 312 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 MGAT1P26572 445 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 ARNTP27540 789 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 NPY2RP49146 381 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 TPMTP51580 245 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 NEK3P51956 506 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 ZNF140P52738 457 aaPredicted RBP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 CRADDP78560 199 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 DMWDQ09019 674 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 CALCOCO2Q13137 446 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 MAP7D1Q3KQU3 841 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 LRRC73Q5JTD7 316 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 MICALCLQ6ZW33 695 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 TMEM135Q86UB9 458 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 GSPT2Q8IYD1 628 aaKnown RBP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 CAMKK1Q8N5S9 505 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 OR13J1Q8NGT2 312 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 BRSK1Q8TDC3 778 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 AENQ8WTP8 325 aaKnown RBP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 PDCD6IPQ8WUM4 868 aaKnown RBP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 IFT81Q8WYA0 676 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCDC142-209ENST00000497232 RAB7BQ96AH8 199 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 SIPA1Q96FS4 1042 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 IFT43Q96FT9 208 aa10.96□□□□□ -0.65
CCDC142-209ENST00000497232 C19orf43Q9BQ61 176 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms