RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CLDN11O75508 207 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 WISP3O95389 354 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 NDST3O95803 873 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 GLP2RO95838 553 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 GOT2P00505 430 aaKnown RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 HOXB8P17481 243 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 ITGAXP20702 1163 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 PPARGP37231 505 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 SLC26A3P40879 764 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 BTKQ06187 659 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 PDCD2Q16342 344 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 CMPK2Q5EBM0 449 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 RALGPS1Q5JS13 557 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 LRRC74BQ6ZQY2 392 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 RNF135Q8IUD6 432 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 DENND1CQ8IV53 801 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 OR52K2Q8NGK3 314 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 GPR150Q8NGU9 434 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 BRSK1Q8TDC3 778 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 ZNF296Q8WUU4 475 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 NAF1Q96HR8 494 aaKnown RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 PPP1R36Q96LQ0 422 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 TBATAQ96M53 351 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 PSKH2Q96QS6 385 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 TRIB3Q96RU7 358 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 RTKNQ9BST9 563 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 UNC93B1Q9H1C4 597 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 ANGPTL2Q9UKU9 493 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 RIMKLBQ9ULI2 386 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 ARHGAP26Q9UNA1 814 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 SSX2IPQ9Y2D8 614 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 LOC100653049A0A140TA62 436 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 NEMP2A6NFY4 417 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 TRPC5OSA6NMA1 111 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 NVLO15381 856 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CD3EAPO15446 510 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 KDELR3O43731 214 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CCNT2O60583 730 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 KRT34O76011 436 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 IPO13O94829 963 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 PARNO95453 639 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 RHOCP08134 193 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 HMGA1P17096 107 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 OGNP20774 298 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 FDXRP22570 491 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 PIK3R1P27986 724 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CORO1AP31146 461 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CDKN2DP55273 166 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CCL23P55773 120 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 RPS24P62847 133 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 RFTN1Q14699 578 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 MUM1Q2TAK8 710 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 SH2D4BQ5SQS7 431 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 KIAA1841Q6NSI8 718 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 MRNIPQ6NTE8 343 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CHST9Q7L1S5 443 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 MYLK4Q86YV6 388 aaPredicted RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CPSF7Q8N684 471 aaKnown RBP13.09□□□□□ -0.31
GARNL3-220ENST00000496711 KDM1BQ8NB78 822 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 DTX3LQ8TDB6 740 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 SPON2Q9BUD6 331 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 ZNF385DQ9H6B1 395 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CYP4F11Q9HBI6 524 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 NMRK1Q9NWW6 199 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 GTSE1Q9NYZ3 720 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 TRPM5Q9NZQ8 1165 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 HSFX1Q9UBD0 423 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 CDH22Q9UJ99 828 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 ACTL7AQ9Y615 435 aa13.09□□□□□ -0.31
GARNL3-220ENST00000496711 A0A1B0GVM2 712 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ILVBLA1L0T0 632 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 CCDC162PA2VCL2 907 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 TCAF2A6NFQ2 919 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 STC2O76061 302 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 UPP2O95045 317 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 LUC7L3O95232 432 aaKnown RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 SEC24AO95486 1093 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 JUNP05412 331 aaKnown RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ADSLP30566 484 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 PEX6Q13608 980 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ZRSR2Q15696 482 aaKnown RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 DEFB128Q7Z7B8 93 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 SLC22A9Q8IVM8 553 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 DEFB107AQ8IZN7 70 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 AFAP1L2Q8N4X5 818 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 PNPLA1Q8N8W4 532 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 OR13C4Q8NGS5 318 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 ANKRD49Q8WVL7 239 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 NRG4Q8WWG1 115 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 LBHD1Q9BQE6 289 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 PPP1R12CQ9BZL4 782 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 CWH43Q9H720 699 aa13.08□□□□□ -0.32
GARNL3-220ENST00000496711 SUDS3Q9H7L9 328 aaPredicted RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 EML4Q9HC35 981 aaKnown RBP13.08□□□□□ -0.32
GARNL3-220ENST00000496711 CYP4F12Q9HCS2 524 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms