RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 NCBP2-AS2Q69YL0 99 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 TIGD7Q6NT04 549 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-213ENST00000496347 KDM7AQ6ZMT4 941 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 MAP7D3Q8IWC1 876 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 APOLD1Q96LR9 279 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 LRRC61Q9BV99 259 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 SLC13A1Q9BZW2 595 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 SCUBE2Q9NQ36 999 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 MBNL1Q9NR56 388 aaKnown RBP15.81■□□□□ 0.12
HDAC4-213ENST00000496347 COQ6Q9Y2Z9 468 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 ZNF487B1APH4 448 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 LMO7DNF2Z398 122 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 CPP00450 1065 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 JUPP14923 745 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 PPARDQ03181 441 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 MMRN1Q13201 1228 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 PRRT3Q5FWE3 981 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 SARM1Q6SZW1 724 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 VSIG1Q86XK7 387 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 RHOT2Q8IXI1 618 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 RBFAQ8N0V3 343 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 PGBD5Q8N414 524 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 FSTL5Q8N475 847 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-213ENST00000496347 TEX26Q8N6G2 289 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 KCTD6Q8NC69 237 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 CCDC42Q96M95 316 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 URB1O60287 2271 aaKnown RBP15.8■□□□□ 0.12
HDAC4-213ENST00000496347 RP1P56715 2156 aa15.8■□□□□ 0.12
HDAC4-213ENST00000496347 LY6G6EA0A0G2JKS1 128 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 NEBLO76041 1014 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 RECQL5O94762 991 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-213ENST00000496347 MTA2O94776 668 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 PRKCGP05129 697 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 PCCBP05166 539 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 MX2P20592 715 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 ARHGAP25P42331 645 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 KIAA1024LP59773 190 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 INSM1Q01101 510 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-213ENST00000496347 ANKRD20A8PQ5CZ79 823 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 ALG1LQ6GMV1 187 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 LIPIQ6XZB0 460 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 DCBLD1Q8N8Z6 715 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 PCDH19Q8TAB3 1148 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 MDM1Q8TC05 714 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 LMX1AQ8TE12 382 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 ZNF830Q96NB3 372 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-213ENST00000496347 IL12RB2Q99665 862 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 ANP32EQ9BTT0 268 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 POLR1EQ9GZS1 481 aaKnown RBP15.79■□□□□ 0.12
HDAC4-213ENST00000496347 NHEJ1Q9H9Q4 299 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-213ENST00000496347 NOD2Q9HC29 1040 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 KCTD5Q9NXV2 234 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 AMACRQ9UHK6 382 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 SALL4Q9UJQ4 1053 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 CLCA2Q9UQC9 943 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 U3KQA8 63 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 LOC400499M0QZD8 3231 aa15.79■□□□□ 0.12
HDAC4-213ENST00000496347 TRABD2BA6NFA1 517 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 RASGRP1O95267 797 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 PGLSO95336 258 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 ALPIP09923 528 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 HK3P52790 923 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 TAS2R40P59535 323 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 TRAF2Q12933 501 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 INPP5AQ14642 412 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 IFI16Q16666 785 aaKnown RBP15.78■□□□□ 0.12
HDAC4-213ENST00000496347 ALG11Q2TAA5 492 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 C6orf132Q5T0Z8 1188 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 ESRP1Q6NXG1 681 aaKnown RBP15.78■□□□□ 0.12
HDAC4-213ENST00000496347 USP45Q70EL2 814 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 MARCH9Q86YJ5 346 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 SDR16C5Q8N3Y7 309 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 MAML1Q92585 1016 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 GLMNQ92990 594 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 NAT6Q93015 286 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 HDAC11Q96DB2 347 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 NSMCE3Q96MG7 304 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 WDR92Q96MX6 357 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 MCCC1Q96RQ3 725 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-213ENST00000496347 BOCQ9BWV1 1114 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 NRSN2Q9GZP1 204 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 CAAP1Q9H8G2 361 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 SPTLC3Q9NUV7 552 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 B4GALT6Q9UBX8 382 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 KLQ9UEF7 1012 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 INTUQ9ULD6 942 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 PNMA8BQ9ULN7 279 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-213ENST00000496347 PHTF1Q9UMS5 762 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 OR1A2Q9Y585 309 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 PCDHGC4Q9Y5F7 938 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 DGKBQ9Y6T7 804 aa15.78■□□□□ 0.12
HDAC4-213ENST00000496347 COL27A1Q8IZC6 1860 aaPredicted RBP15.78■□□□□ 0.12
HDAC4-213ENST00000496347 AKR1B15C9JRZ8 316 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 PSMD11O00231 422 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 TAF4O00268 1085 aa15.77■□□□□ 0.12
HDAC4-213ENST00000496347 CACNB4O00305 520 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 HEXIM1O94992 359 aaKnown RBP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 HOXC4P09017 264 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 CYP2A6P11509 494 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-213ENST00000496347 KRT10P13645 584 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms