RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 VASH2Q86V25 355 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 UMODL1-AS1Q8N2C9 162 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 FAM172AQ8WUF8 416 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 OR1E3Q8WZA6 343 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 PDXPQ96GD0 296 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 TUBGCP5Q96RT8 1024 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 DPEP2Q9H4A9 486 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 CATSPERBQ9H7T0 1116 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 FOXJ2Q9P0K8 574 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 NOCTQ9UK39 431 aaKnown RBP17.66■□□□□ 0.42
TMEM53-209ENST00000495630 ATP8A1Q9Y2Q0 1164 aa17.66■□□□□ 0.42
TMEM53-209ENST00000495630 TMEM202A6NGA9 273 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 C9orf172C9J069 976 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 CACNB4O00305 520 aaPredicted RBP17.65■□□□□ 0.42
TMEM53-209ENST00000495630 BUB1BO60566 1050 aaPredicted RBP17.65■□□□□ 0.42
TMEM53-209ENST00000495630 PPFIA2O75334 1257 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 RFC1P35251 1148 aaPredicted RBP17.65■□□□□ 0.42
TMEM53-209ENST00000495630 TRIM23P36406 574 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 MMP12P39900 470 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 CSNK1DP48730 415 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 MAPK10P53779 464 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 KIAA1024LP59773 190 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 B4GALNT1Q00973 533 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 COLEC12Q5KU26 742 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 CFAP58Q5T655 872 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 KCTD16Q68DU8 428 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 PIM3Q86V86 326 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 PYROXD2Q8N2H3 581 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 PLA2G15Q8NCC3 412 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 SLC30A5Q8TAD4 765 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 FUBP1Q96AE4 644 aaKnown RBP17.65■□□□□ 0.42
TMEM53-209ENST00000495630 SLC25A18Q9H1K4 315 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 DONSONQ9NYP3 566 aa17.65■□□□□ 0.42
TMEM53-209ENST00000495630 UBA2Q9UBT2 640 aaPredicted RBP17.65■□□□□ 0.42
TMEM53-209ENST00000495630 PES1O00541 588 aaKnown RBP17.64■□□□□ 0.41
TMEM53-209ENST00000495630 B4GAT1O43505 415 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 CHRNB2P17787 502 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 WT1P19544 449 aaPredicted RBP17.64■□□□□ 0.41
TMEM53-209ENST00000495630 FMO1Q01740 532 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 CLPPQ16740 277 aaPredicted RBP17.64■□□□□ 0.41
TMEM53-209ENST00000495630 EFHC2Q5JST6 749 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 PHF19Q5T6S3 580 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 SPECC1LQ69YQ0 1117 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 TRIM72Q6ZMU5 477 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 TMPRSS9Q7Z410 1059 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 KIAA1524Q8TCG1 905 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 SLC20A1Q8WUM9 679 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 EXOC2Q96KP1 924 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 C11orf70Q9BRQ4 267 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 TMEM168Q9H0V1 697 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 ADNPQ9H2P0 1102 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 SEMA6CQ9H3T2 930 aa17.64■□□□□ 0.41
TMEM53-209ENST00000495630 AGRPO00253 132 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 PDE2AO00408 941 aaPredicted RBP17.63■□□□□ 0.41
TMEM53-209ENST00000495630 ZW10O43264 779 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 RECQL5O94762 991 aaPredicted RBP17.63■□□□□ 0.41
TMEM53-209ENST00000495630 GFPT2O94808 682 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 CPNE6O95741 557 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 GPD1P21695 349 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 STAT1P42224 750 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 GSCP56915 257 aaPredicted RBP17.63■□□□□ 0.41
TMEM53-209ENST00000495630 CYP4F2P78329 520 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 TSR1Q2NL82 804 aaKnown RBP17.63■□□□□ 0.41
TMEM53-209ENST00000495630 WDR59Q6PJI9 974 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 CAMK1DQ8IU85 385 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 SELENOOQ9BVL4 669 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 FGF22Q9HCT0 170 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 MRPL40Q9NQ50 206 aaKnown RBP17.63■□□□□ 0.41
TMEM53-209ENST00000495630 SEPT3Q9UH03 358 aa17.63■□□□□ 0.41
TMEM53-209ENST00000495630 TLN1Q9Y490 2541 aaKnown RBP17.63■□□□□ 0.41
TMEM53-209ENST00000495630 SIGLEC16A6NMB1 481 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 B4DGG1 531 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 STMND1H3BQB6 276 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 HGSO14964 777 aaPredicted RBP17.62■□□□□ 0.41
TMEM53-209ENST00000495630 CREB3O43889 395 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 UNGP13051 313 aaPredicted RBP17.62■□□□□ 0.41
TMEM53-209ENST00000495630 ERCC5P28715 1186 aaPredicted RBP17.62■□□□□ 0.41
TMEM53-209ENST00000495630 AIF1P55008 147 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 POLR2LP62875 67 aaKnown RBP17.62■□□□□ 0.41
TMEM53-209ENST00000495630 PTP4A2Q12974 167 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 CLCA4Q14CN2 919 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 C16orf72Q14CZ0 275 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 MAP9Q49MG5 647 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 AFMIDQ63HM1 303 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 SCYL2Q6P3W7 929 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 LIPIQ6XZB0 460 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 SRLQ86TD4 932 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 C17orf82Q86X59 251 aaPredicted RBP17.62■□□□□ 0.41
TMEM53-209ENST00000495630 ZSWIM9Q86XI8 627 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 SFTPA2Q8IWL1 248 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 HTR3CQ8WXA8 447 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 TAAR9Q96RI9 348 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 FUCA2Q9BTY2 467 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 SLC12A9Q9BXP2 914 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 ATP13A3Q9H7F0 1226 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 PDFQ9HBH1 243 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 CYP4F12Q9HCS2 524 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 ADAM22Q9P0K1 906 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 FZD10Q9ULW2 581 aa17.62■□□□□ 0.41
TMEM53-209ENST00000495630 UBR5O95071 2799 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms