RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 LIPIQ6XZB0 460 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 CCNI2Q6ZMN8 369 aaPredicted RBP13.4□□□□□ -0.26
RBM28-208ENST00000495327 KDM7AQ6ZMT4 941 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 RHOT1Q8IXI2 618 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 PAF1Q8N7H5 531 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 PLD5Q8N7P1 536 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 KDF1Q8NAX2 398 aaPredicted RBP13.4□□□□□ -0.26
RBM28-208ENST00000495327 BTN2A2Q8WVV5 523 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 ZNF830Q96NB3 372 aaPredicted RBP13.4□□□□□ -0.26
RBM28-208ENST00000495327 PANX2Q96RD6 677 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 DUSP23Q9BVJ7 150 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 NT5MQ9NPB1 228 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 DDX56Q9NY93 547 aaKnown RBP13.4□□□□□ -0.26
RBM28-208ENST00000495327 DTLQ9NZJ0 730 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 PCDHGC4Q9Y5F7 938 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 CSNK1G3Q9Y6M4 447 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 CACNA1BQ00975 2339 aa13.4□□□□□ -0.26
RBM28-208ENST00000495327 COL27A1Q8IZC6 1860 aaPredicted RBP13.4□□□□□ -0.26
RBM28-208ENST00000495327 A0A0A6YYK5 440 aaPredicted RBP13.39□□□□□ -0.27
RBM28-208ENST00000495327 TTC24A2A3L6 582 aaPredicted RBP13.39□□□□□ -0.27
RBM28-208ENST00000495327 TRIM38O00635 465 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 SCAMP1O15126 338 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 PSTPIP1O43586 416 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 SIGLEC6O43699 453 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 LZTS3O60299 673 aaPredicted RBP13.39□□□□□ -0.27
RBM28-208ENST00000495327 PGLSO95336 258 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 MAP3K6O95382 1288 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 KRT1P04264 644 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 GM2AP17900 193 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 CES1P23141 567 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 CYLC1P35663 651 aaPredicted RBP13.39□□□□□ -0.27
RBM28-208ENST00000495327 MAGEA1P43355 309 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 PPIDQ08752 370 aaKnown RBP13.39□□□□□ -0.27
RBM28-208ENST00000495327 ZNF542PQ5EBM4 170 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 MCCC1Q96RQ3 725 aaPredicted RBP13.39□□□□□ -0.27
RBM28-208ENST00000495327 SEMA3CQ99985 751 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 USP29Q9HBJ7 922 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 LUC7LQ9NQ29 371 aaKnown RBP13.39□□□□□ -0.27
RBM28-208ENST00000495327 KCTD5Q9NXV2 234 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 B4GALT6Q9UBX8 382 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 APOBEC3BQ9UH17 382 aaKnown RBP13.39□□□□□ -0.27
RBM28-208ENST00000495327 KLF15Q9UIH9 416 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 PHTF1Q9UMS5 762 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 PPIL1Q9Y3C6 166 aa13.39□□□□□ -0.27
RBM28-208ENST00000495327 PSMD11O00231 422 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 APOL1O14791 398 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 FFAR2O15552 330 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 AQP9O43315 295 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 SPOPO43791 374 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 FZD6O60353 706 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 RECQL5O94762 991 aaPredicted RBP13.38□□□□□ -0.27
RBM28-208ENST00000495327 CCNB1P14635 433 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 ZFXP17010 805 aaPredicted RBP13.38□□□□□ -0.27
RBM28-208ENST00000495327 JUNDP17535 347 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 VIPR1P32241 457 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 SEMG2Q02383 582 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 SLC10A2Q12908 348 aaPredicted RBP13.38□□□□□ -0.27
RBM28-208ENST00000495327 NFATC4Q14934 902 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 SPA17Q15506 151 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 CNGA3Q16281 694 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 ARMC12Q5T9G4 340 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 ESRP1Q6NXG1 681 aaKnown RBP13.38□□□□□ -0.27
RBM28-208ENST00000495327 DHRS13Q6UX07 377 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 GAS2L3Q86XJ1 694 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 CCDC13Q8IYE1 715 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 PHACTR4Q8IZ21 702 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 FAM181AQ8N9Y4 354 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.38□□□□□ -0.27
RBM28-208ENST00000495327 PDCD6IPQ8WUM4 868 aaKnown RBP13.38□□□□□ -0.27
RBM28-208ENST00000495327 COQ10AQ96MF6 247 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 OLFM3Q96PB7 478 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 CAAP1Q9H8G2 361 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 SPASTQ9UBP0 616 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 PNMA8BQ9ULN7 279 aaPredicted RBP13.38□□□□□ -0.27
RBM28-208ENST00000495327 RAI2Q9Y5P3 530 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 ANKRD11Q6UB99 2663 aaPredicted RBP13.38□□□□□ -0.27
RBM28-208ENST00000495327 SCN8AQ9UQD0 1980 aa13.38□□□□□ -0.27
RBM28-208ENST00000495327 K7ESM1 405 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 TPP1O14773 563 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 HEXIM1O94992 359 aaKnown RBP13.37□□□□□ -0.27
RBM28-208ENST00000495327 PCCBP05166 539 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 HLA-DQB2P05538 268 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 CYP2A6P11509 494 aaPredicted RBP13.37□□□□□ -0.27
RBM28-208ENST00000495327 CKMT1AP12532 417 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 COMTP21964 271 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 CA4P22748 312 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 LHCGRP22888 699 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 HTR1BP28222 390 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 BLKP51451 505 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 KIAA1024LP59773 190 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 IFI35P80217 286 aaPredicted RBP13.37□□□□□ -0.27
RBM28-208ENST00000495327 DAB2P98082 770 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 INPP5AQ14642 412 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 TAZQ16635 292 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 C11orf63Q6NUN7 778 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 ZCCHC8Q6NZY4 707 aaKnown RBP13.37□□□□□ -0.27
RBM28-208ENST00000495327 USP45Q70EL2 814 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 TMPRSS12Q86WS5 348 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 TMTC1Q8IUR5 882 aa13.37□□□□□ -0.27
RBM28-208ENST00000495327 RBFAQ8N0V3 343 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms