RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 BRD9Q9H8M2 597 aa16.39■□□□□ 0.21
CBX4-204ENST00000495122 ZNF334Q9HCZ1 680 aaPredicted RBP16.39■□□□□ 0.21
CBX4-204ENST00000495122 CHRAC1Q9NRG0 131 aa16.39■□□□□ 0.21
CBX4-204ENST00000495122 TREX1Q9NSU2 369 aa16.39■□□□□ 0.21
CBX4-204ENST00000495122 UBP1Q9NZI7 540 aa16.39■□□□□ 0.21
CBX4-204ENST00000495122 DCHS1Q96JQ0 3298 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 LOC285095A0A1B0GVY8 99 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 FAM170BA6NMN3 283 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 SOBPA7XYQ1 873 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 TPP1O14773 563 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 PMPCBO75439 489 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 F11P03951 625 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 NEFHP12036 1026 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 PSMC3P17980 439 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 HOXD9P28356 352 aaPredicted RBP16.38■□□□□ 0.21
CBX4-204ENST00000495122 TYK2P29597 1187 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 SLC6A4P31645 630 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 VIPR2P41587 438 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 SKIV2L2P42285 1042 aaKnown RBP16.38■□□□□ 0.21
CBX4-204ENST00000495122 OXCT1P55809 520 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 SETDB1Q15047 1291 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 FAM182AQ5T1J6 154 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 CGB2Q6NT52 195 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 FAM217AQ8IXS0 508 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 HJURPQ8NCD3 748 aaPredicted RBP16.38■□□□□ 0.21
CBX4-204ENST00000495122 ARRDC2Q8TBH0 407 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 SREK1Q8WXA9 508 aaKnown RBP16.38■□□□□ 0.21
CBX4-204ENST00000495122 CLDN23Q96B33 292 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 RSPRY1Q96DX4 576 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 MFSD3Q96ES6 412 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 PSKH2Q96QS6 385 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 GPR22Q99680 433 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 APOL2Q9BQE5 337 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 MGME1Q9BQP7 344 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 TRMT61BQ9BVS5 477 aaKnown RBP16.38■□□□□ 0.21
CBX4-204ENST00000495122 TRIM55Q9BYV6 548 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 FAM96AQ9H5X1 160 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 TRPV5Q9NQA5 729 aa16.38■□□□□ 0.21
CBX4-204ENST00000495122 PIH1D1Q9NWS0 290 aaKnown RBP16.38■□□□□ 0.21
CBX4-204ENST00000495122 UBA2Q9UBT2 640 aaPredicted RBP16.38■□□□□ 0.21
CBX4-204ENST00000495122 H2AFYO75367 372 aaKnown RBP16.37■□□□□ 0.21
CBX4-204ENST00000495122 ATP5HO75947 161 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 BPGMP07738 259 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 RHOCP08134 193 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 MMP2P08253 660 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 SERPINF2P08697 491 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 GRK2P25098 689 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 NMBRP28336 390 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 GDI1P31150 447 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 CD86P42081 329 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 PRKAA2P54646 552 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 ACTN3Q08043 901 aaPredicted RBP16.37■□□□□ 0.21
CBX4-204ENST00000495122 NSUN2Q08J23 767 aaKnown RBP eCLIP16.37■□□□□ 0.21
CBX4-204ENST00000495122 OLIG2Q13516 323 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 THOC5Q13769 683 aaKnown RBP16.37■□□□□ 0.21
CBX4-204ENST00000495122 PDE1CQ14123 709 aaPredicted RBP16.37■□□□□ 0.21
CBX4-204ENST00000495122 HSP90AA5PQ58FG0 334 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 FAM47EQ6ZV65 393 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 GAREM2Q75VX8 874 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 OTOAQ7RTW8 1153 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 DENND1CQ8IV53 801 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 NUDCD3Q8IVD9 361 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 UNC5BQ8IZJ1 945 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 ZNF687Q8N1G0 1237 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 DCLK2Q8N568 766 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 CCDC63Q8NA47 563 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 RDH11Q8TC12 318 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 IRF7Q92985 503 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 E2F7Q96AV8 911 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 ACE2Q9BYF1 805 aaPredicted RBP16.37■□□□□ 0.21
CBX4-204ENST00000495122 SNX15Q9NRS6 342 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.37■□□□□ 0.21
CBX4-204ENST00000495122 LSM7Q9UK45 103 aaKnown RBP16.37■□□□□ 0.21
CBX4-204ENST00000495122 AGO1Q9UL18 857 aaKnown RBP16.37■□□□□ 0.21
CBX4-204ENST00000495122 PSAT1Q9Y617 370 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 R4GN57 208 aa16.37■□□□□ 0.21
CBX4-204ENST00000495122 EP300Q09472 2414 aaPredicted RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 HEPACAM2A8MVW5 462 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 ARNTLO00327 626 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 SLC7A4O43246 635 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 PLIN3O60664 434 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 MBL2P11226 248 aaPredicted RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 TPH1P17752 444 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 GABRR2P28476 465 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 CDC25CP30307 473 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 RPS9P46781 194 aaKnown RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 ARCN1P48444 511 aaKnown RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 CSRP3P50461 194 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 KPNA2P52292 529 aaKnown RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 ITKQ08881 620 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 FZD5Q13467 585 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 TSTD2Q5T7W7 516 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 FSTL4Q6MZW2 842 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 CES3Q6UWW8 571 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 ZNF852Q6ZMS4 543 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 CDHR3Q6ZTQ4 885 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 METTL3Q86U44 580 aaKnown RBP16.36■□□□□ 0.21
CBX4-204ENST00000495122 MFSD6LQ8IWD5 586 aa16.36■□□□□ 0.21
CBX4-204ENST00000495122 MRPS31Q92665 395 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms