RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TOR1BO14657 336 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 BUB1BO60566 1050 aaPredicted RBP13.29□□□□□ -0.28
ERCC3-209ENST00000494464 MAFKO60675 156 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 SDC3O75056 442 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 LDOC1O95751 146 aaPredicted RBP13.29□□□□□ -0.28
ERCC3-209ENST00000494464 C1SP09871 688 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 CDK4P11802 303 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 NME1P15531 152 aaKnown RBP13.29□□□□□ -0.28
ERCC3-209ENST00000494464 CR2P20023 1033 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 IL4RP24394 825 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 IGFALSP35858 605 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 NOP2P46087 812 aaKnown RBP13.29□□□□□ -0.28
ERCC3-209ENST00000494464 ACADVLP49748 655 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 BCL2L1Q07817 233 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 SLC10A7Q0GE19 358 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 DPYSL3Q14195 570 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 FZD2Q14332 565 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 ZNF235Q14590 738 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 AGERQ15109 404 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 PDK2Q15119 407 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 C11orf63Q6NUN7 778 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 ERAP2Q6P179 960 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 TMPRSS7Q7RTY8 843 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 ZSWIM9Q86XI8 627 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 CAMK1DQ8IU85 385 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 LRRC49Q8IUZ0 686 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 KDF1Q8NAX2 398 aaPredicted RBP13.29□□□□□ -0.28
ERCC3-209ENST00000494464 TP53I13Q8NBR0 393 aaPredicted RBP13.29□□□□□ -0.28
ERCC3-209ENST00000494464 MGME1Q9BQP7 344 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 PCDH12Q9NPG4 1184 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 ATP8A1Q9Y2Q0 1164 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 EPG5Q9HCE0 2579 aa13.29□□□□□ -0.28
ERCC3-209ENST00000494464 USP24Q9UPU5 2620 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 AKAP13Q12802 2813 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 ARID1BQ8NFD5 2236 aaPredicted RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 CFAP69A5D8W1 941 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 TRAFD1O14545 582 aaPredicted RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 MFSD11O43934 449 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 MMP20O60882 483 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 SOCS5O75159 536 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 PIAS2O75928 621 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 FTCDO95954 541 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 TUBBP07437 444 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 KRT7P08729 469 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 CD48P09326 243 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 ITIH2P19823 946 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 DGKAP23743 735 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 SSR1P43307 286 aaKnown RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 TAS2R40P59535 323 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 HNRNPKP61978 463 aaKnown RBP eCLIP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 YPEL5P62699 121 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 PAFAH1B3Q15102 231 aaKnown RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 SMAD1Q15797 465 aaKnown RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 PROX2Q3B8N5 592 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 RALGPS1Q5JS13 557 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 CPNE8Q86YQ8 564 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 BBS5Q8N3I7 341 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 GALNT15Q8N3T1 639 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 OR4C6Q8NH72 309 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 SLC35G2Q8TBE7 412 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 FAF2Q96CS3 445 aa13.28□□□□□ -0.28
ERCC3-209ENST00000494464 WRAP53Q9BUR4 548 aaKnown RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 ARGLU1Q9NWB6 273 aaPredicted RBP13.28□□□□□ -0.28
ERCC3-209ENST00000494464 LRP4O75096 1905 aa13.27□□□□□ -0.28
ERCC3-209ENST00000494464 A0A1W2PQ67 120 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 GOLGA8CPA6NN73 597 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 ZNF487B1APH4 448 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 H3BM21 787 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 RFPL3O75679 317 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 CSF2P04141 144 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 GIMD1P0DJR0 217 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 C6P13671 934 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 GJC1P36383 396 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 SCNN1BP51168 640 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 POLR2LP62875 67 aaKnown RBP13.27□□□□□ -0.29
ERCC3-209ENST00000494464 GALNT2Q10471 571 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 RALGDSQ12967 914 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 DNAJC3Q13217 504 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 ZNF211Q13398 564 aaPredicted RBP13.27□□□□□ -0.29
ERCC3-209ENST00000494464 ILKQ13418 452 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 PDE1CQ14123 709 aaPredicted RBP13.27□□□□□ -0.29
ERCC3-209ENST00000494464 PTK2BQ14289 1009 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 RPS6KA1Q15418 735 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 NCBP2-AS2Q69YL0 99 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 MAP7D3Q8IWC1 876 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 COG1Q8WTW3 980 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 NSMCE1Q8WV22 266 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 NUDCD1Q96RS6 583 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 UCKL1Q9NWZ5 548 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 DNAJC28Q9NX36 388 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 NLGN3Q9NZ94 848 aa13.27□□□□□ -0.29
ERCC3-209ENST00000494464 TRIM38O00635 465 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 ZNF185O15231 689 aa13.26□□□□□ -0.29
ERCC3-209ENST00000494464 HTRA2O43464 458 aaPredicted RBP13.26□□□□□ -0.29
ERCC3-209ENST00000494464 ALPPL2P10696 532 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms