RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 CMASQ8NFW8 434 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-207ENST00000494412 AFAP1L1Q8TED9 768 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 MRPS27Q92552 414 aaKnown RBP4.32□□□□□ -1.72
CMSS1-207ENST00000494412 SECISBP2LQ93073 1101 aaKnown RBP4.32□□□□□ -1.72
CMSS1-207ENST00000494412 PTERQ96BW5 349 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 RNF183Q96D59 192 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 REPS1Q96D71 796 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 ZNF419Q96HQ0 510 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-207ENST00000494412 PDLIM2Q96JY6 352 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 TUBB6Q9BUF5 446 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 ZNF747Q9BV97 191 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 MAGEE1Q9HCI5 957 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 XAB2Q9HCS7 855 aaKnown RBP4.32□□□□□ -1.72
CMSS1-207ENST00000494412 ANAPC2Q9UJX6 822 aa4.32□□□□□ -1.72
CMSS1-207ENST00000494412 EPN1Q9Y6I3 576 aaPredicted RBP4.32□□□□□ -1.72
CMSS1-207ENST00000494412 A0A096LPK6 155 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 SMTNL1A8MU46 457 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 GPC4O75487 556 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 NEURL1O76050 574 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 CHRM5P08912 532 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-207ENST00000494412 MMP9P14780 707 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 SRD5A1P18405 259 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 TFEBP19484 476 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ANXA7P20073 488 aaKnown RBP4.31□□□□□ -1.72
CMSS1-207ENST00000494412 SHMT1P34896 483 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 RFC1P35251 1148 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-207ENST00000494412 CENPAP49450 140 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 SORDQ00796 357 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 PPP2R5CQ13362 524 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ALCAMQ13740 583 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 KCNC3Q14003 757 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 PGM5Q15124 567 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ADIPOQQ15848 244 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 CDONQ4KMG0 1287 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ALG10Q5BKT4 473 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ALG10BQ5I7T1 473 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 PMS2CLQ68D20 193 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 HIST2H2BCQ6DN03 193 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 HIST2H2BDQ6DRA6 164 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 FBXO46Q6PJ61 603 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-207ENST00000494412 AMIGO2Q86SJ2 522 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 VRK3Q8IV63 474 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ADGRF4Q8IZF3 695 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 DPP10Q8N608 796 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 MSANTD4Q8NCY6 345 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 OR14L1PQ8NHC6 308 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ZNF622Q969S3 477 aaKnown RBP eCLIP4.31□□□□□ -1.72
CMSS1-207ENST00000494412 MOAP1Q96BY2 351 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 RAB3IPQ96QF0 476 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-207ENST00000494412 FNBP1Q96RU3 617 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 TMEM47Q9BQJ4 181 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 C1QTNF1Q9BXJ1 281 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ST6GALNAC4Q9H4F1 302 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 MOV10Q9HCE1 1003 aaKnown RBP4.31□□□□□ -1.72
CMSS1-207ENST00000494412 CPNE5Q9HCH3 593 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 PFDN4Q9NQP4 134 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 IL17RBQ9NRM6 502 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 PSD3Q9NYI0 1048 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 AMACRQ9UHK6 382 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 PLAGL1Q9UM63 463 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 CEPT1Q9Y6K0 416 aa4.31□□□□□ -1.72
CMSS1-207ENST00000494412 ZFP37Q9Y6Q3 630 aaPredicted RBP4.31□□□□□ -1.72
CMSS1-207ENST00000494412 C1orf226A1L170 272 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 TRIM64A6NGJ6 449 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 TRIM64BA6NI03 449 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 TARM1B6A8C7 271 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 RHODO00212 210 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 MGST3O14880 152 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 OGG1O15527 345 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 RNMTO43148 476 aaKnown RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 SLC7A4O43246 635 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 LCKP06239 509 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 TFPIP10646 304 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 ETFAP13804 333 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 FDPSP14324 419 aaKnown RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 TACR2P21452 398 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 ATP5DP30049 168 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 TLX1P31314 330 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 GP5P40197 560 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 MATR3P43243 847 aaKnown RBP eCLIP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 GPR12P47775 334 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 SUOXP51687 545 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 SIM1P81133 766 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 TMF1P82094 1093 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 DDR1Q08345 913 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 ITGADQ13349 1161 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 FOXE3Q13461 319 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 IL11RAQ14626 422 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 SHBQ15464 509 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 LSM12Q3MHD2 195 aaKnown RBP4.3□□□□□ -1.72
CMSS1-207ENST00000494412 CRY2Q49AN0 593 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 SLC10A5Q5PT55 438 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 C6orf141Q5SZD1 244 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 AKNAD1Q5T1N1 836 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 LRIF1Q5T3J3 769 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 KRT79Q5XKE5 535 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 IGFL4Q6B9Z1 124 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 SLC2A7Q6PXP3 512 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
CMSS1-207ENST00000494412 CCDC91Q7Z6B0 441 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms