RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 MMP12P39900 470 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 SEMG2Q02383 582 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 ARHGEF7Q14155 803 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 SLC1A5Q15758 541 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 QPCTQ16769 361 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 SIRPB2Q5JXA9 342 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 KCTD11Q693B1 232 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 C8orf74Q6P047 294 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 PPP1R21Q6ZMI0 780 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 DPPA4Q7L190 304 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 KLHDC8BQ8IXV7 354 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 PRSS33Q8NF86 280 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 TRIM51Q9BSJ1 452 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 B4GALT6Q9UBX8 382 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 GGT7Q9UJ14 662 aa14.63□□□□□ -0.07
BRCA1-223ENST00000494123 FAM187AA6NFU0 413 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 SPINT1O43278 529 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 RAD51CO43502 376 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 HRO43593 1189 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 RNGTTO60942 597 aaKnown RBP14.62□□□□□ -0.07
BRCA1-223ENST00000494123 FSBPO95073 299 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 ATXN1LP0C7T5 689 aaKnown RBP14.62□□□□□ -0.07
BRCA1-223ENST00000494123 VIPR1P32241 457 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 ADRA1AP35348 466 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 HNF1BP35680 557 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 CHRNA4P43681 627 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 OLIG2Q13516 323 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 KIAA1161Q6NSJ0 714 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 NEK5Q6P3R8 708 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 LPCAT2Q7L5N7 544 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 MCCC1Q96RQ3 725 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-223ENST00000494123 SRPK1Q96SB4 655 aaKnown RBP14.62□□□□□ -0.07
BRCA1-223ENST00000494123 WRAP53Q9BUR4 548 aaKnown RBP14.62□□□□□ -0.07
BRCA1-223ENST00000494123 CARD6Q9BX69 1037 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 IRF2BPLQ9H1B7 796 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 C6orf106Q9H6K1 298 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-223ENST00000494123 EIF2B3Q9NR50 452 aaKnown RBP14.62□□□□□ -0.07
BRCA1-223ENST00000494123 PPIL1Q9Y3C6 166 aa14.62□□□□□ -0.07
BRCA1-223ENST00000494123 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 A0A1W2PQU0 124 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 NPIPB15A6NHN6 443 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-223ENST00000494123 LILRB5O75023 590 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 ELFN1P0C7U0 828 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 PTPN5P54829 565 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 RPS21P63220 83 aaKnown RBP14.61□□□□□ -0.07
BRCA1-223ENST00000494123 MRPS25P82663 173 aaKnown RBP14.61□□□□□ -0.07
BRCA1-223ENST00000494123 TCF15Q12870 199 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 SIM2Q14190 667 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-223ENST00000494123 ELF2Q15723 593 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 TMEM52BQ4KMG9 183 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 KIAA0895LQ68EN5 471 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 RANBP10Q6VN20 620 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 PRR23BQ6ZRT6 265 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 TMEFF1Q8IYR6 380 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 DEFB119Q8N690 84 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 DNAAF3Q8N9W5 541 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 CADM4Q8NFZ8 388 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 SNX19Q92543 992 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 FOXJ1Q92949 421 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 SMIM14Q96QK8 99 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 TRIM31Q9BZY9 425 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 PCED1AQ9H1Q7 454 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 KCNH6Q9H252 994 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 TPX2Q9ULW0 747 aaKnown RBP14.61□□□□□ -0.07
BRCA1-223ENST00000494123 HCN4Q9Y3Q4 1203 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 R4GN57 208 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 CEP192Q8TEP8 1941 aa14.61□□□□□ -0.07
BRCA1-223ENST00000494123 C1orf232A0A0U1RR37 186 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 MEI4A8MW99 385 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 EFCAB8A8MWE9 144 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 MMP20O60882 483 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 RHOBTB1O94844 696 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 SUN1O94901 812 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 PIRTP0C851 137 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 TPSB2P20231 275 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 MAT2AP31153 395 aaKnown RBP14.6□□□□□ -0.07
BRCA1-223ENST00000494123 LIG3P49916 1009 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 PPP2CBP62714 309 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 PPP2CAP67775 309 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 SARNPP82979 210 aaKnown RBP14.6□□□□□ -0.07
BRCA1-223ENST00000494123 CDK16Q00536 496 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 CDH17Q12864 832 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 TPSAB1Q15661 275 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 DENND2CQ68D51 928 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 PCGF5Q86SE9 256 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 TRIM69Q86WT6 500 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 HORMAD1Q86X24 394 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 PPIL6Q8IXY8 311 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 MMGT1Q8N4V1 131 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 OR52K1Q8NGK4 314 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 BLOC1S5Q8TDH9 187 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 CPT1BQ92523 772 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 RAB17Q9H0T7 212 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 L2HGDHQ9H9P8 463 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 MAGEE1Q9HCI5 957 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 UTP11Q9Y3A2 253 aaKnown RBP14.6□□□□□ -0.07
BRCA1-223ENST00000494123 THADAQ6YHU6 1953 aa14.6□□□□□ -0.07
BRCA1-223ENST00000494123 DNALI1O14645 258 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 LZTS3O60299 673 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-223ENST00000494123 TM7SF2O76062 418 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms