RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GGT7Q9UJ14 662 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 CAPN8A6NHC0 703 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 AURKAO14965 403 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 PI15O43692 258 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 ATG13O75143 517 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 RNASEH2AO75792 299 aaKnown RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 GABRG2P18507 467 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 P2RY2P41231 377 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 RPL26P61254 145 aaKnown RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 CES3Q6UWW8 571 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 USP45Q70EL2 814 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 ERN2Q76MJ5 926 aaKnown RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 GLT6D1Q7Z4J2 308 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 TSPAN33Q86UF1 283 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 HDDC3Q8N4P3 179 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 FBXO36Q8NEA4 188 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 PPHLN1Q8NEY8 458 aaKnown RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 TSTD1Q8NFU3 115 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 CLDN23Q96B33 292 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 SIPA1Q96FS4 1042 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 MRGPRX1Q96LB2 322 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 OSBPL6Q9BZF3 934 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 FBRSQ9HAH7 460 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 POLMQ9NP87 494 aaPredicted RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 CD93Q9NPY3 652 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 SAMD15Q9P1V8 674 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 DKK3Q9UBP4 350 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 RPL26L1Q9UNX3 145 aaKnown RBP19.46■□□□□ 0.71
USP39-218ENST00000493829 ZNF711Q9Y462 761 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 ARL5AQ9Y689 179 aa19.46■□□□□ 0.71
USP39-218ENST00000493829 TMEM221A6NGB7 291 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 SDR42E2A6NKP2 422 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 GOLGA8CPA6NN73 597 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 M0R296 226 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 ALADP13716 330 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 ADRB3P13945 408 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 C5AR1P21730 350 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 DRD3P35462 400 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 NPY2RP49146 381 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 NEK3P51956 506 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 DGKEP52429 567 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 UBAP2Q5T6F2 1119 aaKnown RBP19.45■□□□□ 0.7
USP39-218ENST00000493829 LYSMD3Q7Z3D4 306 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 FAM124AQ86V42 546 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 EIF1ADQ8N9N8 165 aaKnown RBP19.45■□□□□ 0.7
USP39-218ENST00000493829 AENQ8WTP8 325 aaKnown RBP19.45■□□□□ 0.7
USP39-218ENST00000493829 STAMBPL1Q96FJ0 436 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 SIGLEC10Q96LC7 697 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 FOXP3Q9BZS1 431 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 IL22Q9GZX6 179 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 PABPC3Q9H361 631 aaKnown RBP19.45■□□□□ 0.7
USP39-218ENST00000493829 B4GALT6Q9UBX8 382 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 KCTD3Q9Y597 815 aa19.45■□□□□ 0.7
USP39-218ENST00000493829 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.45■□□□□ 0.7
USP39-218ENST00000493829 C1orf232A0A0U1RR37 186 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 E7ESA3 106 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 AP3B1O00203 1094 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 TUBBP07437 444 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 MAGEA4P43358 317 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 POLR2LP62875 67 aaKnown RBP19.44■□□□□ 0.7
USP39-218ENST00000493829 TMEM31Q5JXX7 168 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.44■□□□□ 0.7
USP39-218ENST00000493829 MICALCLQ6ZW33 695 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 TMC3Q7Z5M5 1100 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 NDUFAF2Q8N183 169 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 MDGA1Q8NFP4 955 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 OMDQ99983 421 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 CHRAC1Q9NRG0 131 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 FBXL12Q9NXK8 326 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.44■□□□□ 0.74e-10■■■□□ 17.5
USP39-218ENST00000493829 BDP1A6H8Y1 2624 aa19.44■□□□□ 0.7
USP39-218ENST00000493829 A0A1W2PQ67 120 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 SPINT1O43278 529 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 ACADMP11310 421 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 LHCGRP22888 699 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 RPS9P46781 194 aaKnown RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 PXNP49023 591 aaPredicted RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 MSLNQ13421 630 aaPredicted RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 PTPRCAPQ14761 206 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 PIP5KL1Q5T9C9 394 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 PYROXD1Q8WU10 500 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 ZNF778Q96MU6 729 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 WRAP53Q9BUR4 548 aaKnown RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 GPR63Q9BZJ6 419 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 ZC3H7BQ9UGR2 993 aaKnown RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 FNDC3AQ9Y2H6 1198 aaKnown RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 TCAF1Q9Y4C2 921 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 TEX264Q9Y6I9 313 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 CCL22O00626 93 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 TMPRSS15P98073 1019 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 TTC31Q49AM3 519 aaPredicted RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 AGBL4Q5VU57 503 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 LRRC66Q68CR7 880 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 ERAP2Q6P179 960 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 CRTC1Q6UUV9 634 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 SPEM1Q8N4L4 309 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 ZNF669Q96BR6 464 aaPredicted RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 SCRN2Q96FV2 425 aa19.43■□□□□ 0.7
USP39-218ENST00000493829 MCCC1Q96RQ3 725 aaPredicted RBP19.43■□□□□ 0.7
USP39-218ENST00000493829 EBNA1BP2Q99848 306 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms