RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 CRTC2Q53ET0 693 aaPredicted RBP14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 INO80DQ53TQ3 878 aaPredicted RBP14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 FAM102AQ5T9C2 384 aaPredicted RBP14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 GJB7Q6PEY0 223 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 ARCQ7LC44 396 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 HSCBQ8IWL3 235 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 RCBTB1Q8NDN9 531 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 OR4D9Q8NGE8 314 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 APOBEC4Q8WW27 367 aaKnown RBP14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 HMCESQ96FZ2 354 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 ABHD17AQ96GS6 310 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 DPYSL5Q9BPU6 564 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 NEU3Q9UQ49 428 aa14.33□□□□□ -0.12
PRPF40A-211ENST00000493468 TMEM202A6NGA9 273 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 B4E171 279 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 PCCBP05166 539 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 FLT3P36888 993 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 MMP12P39900 470 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 TSPAN7P41732 249 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 OR1D5P58170 312 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 GRM3Q14832 879 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 UGP2Q16851 508 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 AMZ1Q400G9 498 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 ERAP2Q6P179 960 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 FAM131BQ86XD5 332 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 XYLT1Q86Y38 959 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 ART4Q93070 314 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 FUBP1Q96AE4 644 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 KIAA1143Q96AT1 154 aaPredicted RBP14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 TEFMQ96QE5 360 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 TMEM168Q9H0V1 697 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 PCDH12Q9NPG4 1184 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 OR12D3Q9UGF7 316 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 DNAI1Q9UI46 699 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 PILRAQ9UKJ1 303 aa14.32□□□□□ -0.12
PRPF40A-211ENST00000493468 PRR19A6NJB7 356 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 RHPN2P1A8MT19 583 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 NKX2-8O15522 239 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 THRAP10827 490 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 CD1CP29017 333 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 TRIM23P36406 574 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 STAT1P42224 750 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 LIG3P49916 1009 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 RHOAP61586 193 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 SEPT6Q14141 434 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 TRNP1Q6NT89 227 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 BRAT1Q6PJG6 821 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 PLA2G15Q8NCC3 412 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 TMEM35BQ8NCS4 154 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 NELFBQ8WX92 580 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 C18orf8Q96DM3 657 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 CFAP57Q96MR6 1250 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 SPRY4Q9C004 299 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 GPN2Q9H9Y4 310 aaPredicted RBP14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 MRPL40Q9NQ50 206 aaKnown RBP14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 HOOK1Q9UJC3 728 aaKnown RBP14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 TMEM59LQ9UK28 342 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 ZDHHC9Q9Y397 364 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 CACNA1DQ01668 2161 aa14.31□□□□□ -0.12
PRPF40A-211ENST00000493468 CENPEQ02224 2701 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 MTSS1O43312 755 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 BUB1O43683 1085 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 DUX1O43812 170 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 CCNB1P14635 433 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 MAP4P27816 1152 aaKnown RBP14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 ALDH4A1P30038 563 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 CSTF2P33240 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 MAZP56270 477 aaKnown RBP14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 MC1RQ01726 317 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 DCAF12Q5T6F0 453 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 RWDD4Q6NW29 188 aaKnown RBP14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 LEKR1Q6ZMV7 388 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 SLC47A2Q86VL8 602 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 DNAAF5Q86Y56 855 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 NLGN4XQ8N0W4 816 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 NLGN4YQ8NFZ3 816 aaPredicted RBP14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 CCL4L1Q8NHW4 92 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 ZDHHC1Q8WTX9 485 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 ZNF641Q96N77 438 aaPredicted RBP14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 CRACR2AQ9BSW2 395 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 CYP4F12Q9HCS2 524 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 SLC39A1Q9NY26 324 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 ATP8A1Q9Y2Q0 1164 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 DAAM1Q9Y4D1 1078 aa14.3□□□□□ -0.12
PRPF40A-211ENST00000493468 PRSS38A1L453 326 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 GTPBP10A4D1E9 387 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 PPP1R3GB7ZBB8 358 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 PDE2AO00408 941 aaPredicted RBP14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 INSIG1O15503 277 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 LRIG2O94898 1065 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 PIGNO95427 931 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 FGF1P05230 155 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 SLC9A1P19634 815 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 OAS2P29728 719 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 ADRA1BP35368 520 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 CLCN1P35523 988 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 ABHD18Q0P651 414 aa14.29□□□□□ -0.12
PRPF40A-211ENST00000493468 HIST2H2BCQ6DN03 193 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms