RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FAM170AA1A519 330 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 AGRPO00253 132 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 INSIG1O15503 277 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 HOXC4P09017 264 aaPredicted RBP17.77■□□□□ 0.44
NUP50-218ENST00000493456 PTPN9P43378 593 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 YBEYP58557 167 aaPredicted RBP17.77■□□□□ 0.44
NUP50-218ENST00000493456 B4GALNT1Q00973 533 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 KCNAB2Q13303 367 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 MAN2A1Q16706 1144 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 TSR1Q2NL82 804 aaKnown RBP17.77■□□□□ 0.44
NUP50-218ENST00000493456 CCDC14Q49A88 953 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 RAB6CQ53S08 254 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 EFHC2Q5JST6 749 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 NAA35Q5VZE5 725 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 KCTD16Q68DU8 428 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 RXFP2Q8WXD0 754 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 NTAN1Q96AB6 310 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 FUBP1Q96AE4 644 aaKnown RBP17.77■□□□□ 0.44
NUP50-218ENST00000493456 ZNF641Q96N77 438 aaPredicted RBP17.77■□□□□ 0.44
NUP50-218ENST00000493456 RAB6CQ9H0N0 254 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 DPEP2Q9H4A9 486 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 NOL6Q9H6R4 1146 aaKnown RBP17.77■□□□□ 0.44
NUP50-218ENST00000493456 FGF22Q9HCT0 170 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 LHX3Q9UBR4 397 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 ATP8A1Q9Y2Q0 1164 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 PCDHGA3Q9Y5H0 932 aa17.77■□□□□ 0.44
NUP50-218ENST00000493456 TMEM202A6NGA9 273 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 GP1BBP13224 206 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 PRKCSHP14314 528 aaPredicted RBP17.76■□□□□ 0.43
NUP50-218ENST00000493456 POLE2P56282 527 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 SERINC3Q13530 473 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 PARP15Q460N3 678 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 ZNF438Q7Z4V0 828 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 NOP9Q86U38 636 aaKnown RBP17.76■□□□□ 0.43
NUP50-218ENST00000493456 CCDC185Q8N715 623 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 PLA2G15Q8NCC3 412 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 EXOC2Q96KP1 924 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 TAAR9Q96RI9 348 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 TUBGCP5Q96RT8 1024 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 TMEM168Q9H0V1 697 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 CDH19Q9H159 772 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 EPN3Q9H201 632 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 FHOD1Q9Y613 1164 aa17.76■□□□□ 0.43
NUP50-218ENST00000493456 C2CD4BA6NLJ0 364 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 RASA4BC9J798 803 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 RASA4O43374 803 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 MMEP08473 750 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 EPHB2P29323 1055 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 NR1D2Q14995 579 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 DPY19L2P1Q6NXN4 242 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 ZNF677Q86XU0 584 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 PTRH1Q86Y79 214 aaKnown RBP17.75■□□□□ 0.43
NUP50-218ENST00000493456 IL22RA1Q8N6P7 574 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 NETO2Q8NC67 525 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 CCDC112Q8NEF3 446 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 EPS8L1Q8TE68 723 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 FAM172AQ8WUF8 416 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 CENPIQ92674 756 aaPredicted RBP17.75■□□□□ 0.43
NUP50-218ENST00000493456 NKD1Q969G9 470 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 CATSPER2Q96P56 530 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 KLC2Q9H0B6 622 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 NDST4Q9H3R1 872 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 RDH14Q9HBH5 336 aa17.75■□□□□ 0.43
NUP50-218ENST00000493456 MRPL40Q9NQ50 206 aaKnown RBP17.75■□□□□ 0.43
NUP50-218ENST00000493456 UBA2Q9UBT2 640 aaPredicted RBP17.75■□□□□ 0.43
NUP50-218ENST00000493456 ANKRD36A6QL64 1941 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 RHPN2P1A8MT19 583 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 RECQL5O94762 991 aaPredicted RBP17.74■□□□□ 0.43
NUP50-218ENST00000493456 CCL4P13236 92 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 MMP8P22894 467 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 TRIM23P36406 574 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 CASRP41180 1078 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 STAT1P42224 750 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 CCR10P46092 362 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 HDAC4P56524 1084 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 FOXK1P85037 733 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 TRA2AQ13595 282 aaKnown RBP eCLIP17.74■□□□□ 0.43
NUP50-218ENST00000493456 CYTH1Q15438 398 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 AMZ1Q400G9 498 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 KLHDC7AQ5VTJ3 777 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 C17orf82Q86X59 251 aaPredicted RBP17.74■□□□□ 0.43
NUP50-218ENST00000493456 FAM114A1Q8IWE2 563 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 SFTPA2Q8IWL1 248 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 GPT2Q8TD30 523 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 JPH3Q8WXH2 748 aaPredicted RBP17.74■□□□□ 0.43
NUP50-218ENST00000493456 MAGEB5Q9BZ81 275 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 WDR26Q9H7D7 661 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 CYP4F12Q9HCS2 524 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 ANAPC2Q9UJX6 822 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 SDK2Q58EX2 2172 aa17.74■□□□□ 0.43
NUP50-218ENST00000493456 UTP20O75691 2785 aaKnown RBP17.73■□□□□ 0.43
NUP50-218ENST00000493456 IGHV5-10-1A0A0J9YXX1 117 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 PRSS38A1L453 326 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 WASH4PA8MWX3 477 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 PDE2AO00408 941 aaPredicted RBP17.73■□□□□ 0.43
NUP50-218ENST00000493456 CAPN5O15484 640 aaPredicted RBP17.73■□□□□ 0.43
NUP50-218ENST00000493456 B4GAT1O43505 415 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 ELFN1P0C7U0 828 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 SERPINA4P29622 427 aa17.73■□□□□ 0.43
NUP50-218ENST00000493456 OR1D5P58170 312 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms