RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 FUT11Q495W5 492 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 ARMC12Q5T9G4 340 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 MRNIPQ6NTE8 343 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 CNSTQ6PJW8 725 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 TRPM8Q7Z2W7 1104 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 CCDC91Q7Z6B0 441 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 PTAR1Q7Z6K3 402 aaPredicted RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 ADGRD2Q7Z7M1 963 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 RBM23Q86U06 439 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 MFSD6LQ8IWD5 586 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 PLD6Q8N2A8 252 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 EFHBQ8N7U6 833 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 OR13C4Q8NGS5 318 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 GPR150Q8NGU9 434 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 ZNF398Q8TD17 642 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 PDCD6IPQ8WUM4 868 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 C10orf82Q8WW14 230 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 SREK1Q8WXA9 508 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 ING5Q8WYH8 240 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 SMG7Q92540 1137 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 OTUB2Q96DC9 234 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 TSPAN17Q96FV3 270 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 LMLNQ96KR4 655 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 TBATAQ96M53 351 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 C7orf26Q96N11 449 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 BBS2Q9BXC9 721 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 TRIM55Q9BYV6 548 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 TM6SF2Q9BZW4 377 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 TLE6Q9H808 572 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 CATSPERZQ9NTU4 200 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 ABCB8Q9NUT2 735 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 NLE1Q9NVX2 485 aaPredicted RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 POLR3BQ9NW08 1133 aaPredicted RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 SLC25A13Q9UJS0 675 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 INTS6Q9UL03 887 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 CORO1CQ9ULV4 474 aaPredicted RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 YBX2Q9Y2T7 364 aaKnown RBP9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 USH1CQ9Y6N9 552 aa9.18□□□□□ -0.94
SMARCC1-208ENST00000492896 OR51F1A6NGY5 319 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 ANKRD66B4E2M5 251 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 K7ERQ8 282 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 AURKAO14965 403 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 CD3EAPO15446 510 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 BUD23O43709 281 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 FZD6O60353 706 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 H2AFYO75367 372 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 HAUS5O94927 633 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 PGLSO95336 258 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 TGDSO95455 350 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 MT-CO1P00395 513 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 SERPINE1P05121 402 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 PDHA1P08559 390 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 SLC35E2BP0CK96 405 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 FGF3P11487 239 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 PABPC1P11940 636 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 TYRP14679 529 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 CPA3P15088 417 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 HOXB8P17481 243 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 LPOP22079 712 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 PSMA3P25788 255 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 HLA-FP30511 346 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 GMPRP36959 345 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 TAS2R39P59534 338 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 RPL26P61254 145 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 BCL2L1Q07817 233 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 STX3Q13277 289 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 DMC1Q14565 340 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 PTPRCAPQ14761 206 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 TSNAXIP1Q2TAA8 658 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 RBM20Q5T481 1227 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 MBLAC2Q68D91 279 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 LRRC8EQ6NSJ5 796 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 FAM45BPQ6NSW5 357 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 C22orf39Q6P5X5 142 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 TMEM25Q86YD3 366 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 CRLF3Q8IUI8 442 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 PAF1Q8N7H5 531 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 OR4K2Q8NGD2 314 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 OR4L1Q8NH43 312 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 TTC8Q8TAM2 541 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 RDH11Q8TC12 318 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 FAM45AQ8TCE6 357 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 SCG3Q8WXD2 468 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 CCT6BQ92526 530 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 IRF7Q92985 503 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 THOC1Q96FV9 657 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 SCYL1Q96KG9 808 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 RMDN2Q96LZ7 410 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 NDNQ99608 321 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 C1QTNF1Q9BXJ1 281 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 KDM4CQ9H3R0 1056 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 ATP13A3Q9H7F0 1226 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 SFXN1Q9H9B4 322 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 ACTR5Q9H9F9 607 aaPredicted RBP9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 CERS4Q9HA82 394 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 NMRAL1Q9HBL8 299 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 NPHS2Q9NP85 383 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 SPHK2Q9NRA0 654 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 ABCF3Q9NUQ8 709 aa9.17□□□□□ -0.94
SMARCC1-208ENST00000492896 ZNF358Q9NW07 568 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms