RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SDK1Q7Z5N4 2213 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF292O60281 2723 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 EDDM13A0A1B0GTR0 161 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 EEF2KO00418 725 aaKnown RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 NDC80O14777 642 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 HNRNPCL1O60812 293 aaKnown RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF821O75541 412 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 DESP17661 470 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 METAP1P53582 386 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 TAS2R40P59535 323 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 TPI1P60174 286 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 P3H1Q32P28 736 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 PPP6R3Q5H9R7 873 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 IL31Q6EBC2 164 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 Q6ZVU0 165 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 KATNAL2Q8IYT4 538 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 EXD1Q8NHP7 514 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 HSPH1Q92598 858 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 C2orf49Q9BVC5 232 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 ARRDC1-AS1Q9H2J1 176 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 TRABDQ9H4I3 376 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 RETREG1Q9H6L5 497 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 NCDNQ9UBB6 729 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 HAO1Q9UJM8 370 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 MFHAS1Q9Y4C4 1052 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 GPR179Q6PRD1 2367 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 ZBTB24O43167 697 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 EDF1O60869 148 aaKnown RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 ZNF217O75362 1048 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SPAG7O75391 227 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 EPN2O95208 641 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 GNAZP19086 355 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 CA4P22748 312 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 PTGER3P43115 390 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SPEM2Q0P670 501 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 WASHC2DQ5SRD0 308 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 ARMCX6Q7L4S7 300 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 FAM124AQ86V42 546 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 MMAAQ8IVH4 418 aaKnown RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SLC41A1Q8IVJ1 513 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 TP53INP2Q8IXH6 220 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 LMNTD2Q8IXW0 634 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 ATP11CQ8NB49 1132 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 DENND1AQ8TEH3 1009 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 MAGEH1Q9H213 219 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SMOC1Q9H4F8 434 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SAYSD1Q9NPB0 183 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 WSB2Q9NYS7 404 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SERGEFQ9UGK8 458 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 SARDHQ9UL12 918 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 LRRC42Q9Y546 428 aa9.5□□□□□ -0.89
BRCA1-219ENST00000491747 ADAMTS9Q9P2N4 1935 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 POC1B-GALNT4F8VUJ3 575 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 TRAFD1O14545 582 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 DNALI1O14645 258 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 MAP3K13O43283 966 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 RAMP2O60895 175 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 RHOBTB1O94844 696 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 IGLV3-19P01714 112 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 RETP07949 1114 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 CD48P09326 243 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 TPBGLP0DKB5 382 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ERCC2P18074 760 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 NNMTP40261 264 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 DPYSQ14117 519 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 POLD3Q15054 466 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 RASA2Q15283 850 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 DPYSL2Q16555 572 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 BOLA3Q53S33 107 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 RFX8Q6ZV50 586 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 PSTKQ8IV42 348 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 UMODL1-AS1Q8N2C9 162 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 FAM13CQ8NE31 585 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 HMCESQ96FZ2 354 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 TOE1Q96GM8 510 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 CELF6Q96J87 481 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 NUDCD1Q96RS6 583 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 TNKS2Q9H2K2 1166 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 CATSPERBQ9H7T0 1116 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 SLCO1B3Q9NPD5 702 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ETNK2Q9NVF9 386 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 FCF1Q9Y324 198 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 PLK4O00444 970 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 MID1O15344 667 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 FGF10O15520 208 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 KDELR3O43731 214 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 BNIP3LO60238 219 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 PEX11AO75192 247 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 CTSLP07711 333 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ACADMP11310 421 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 AMPD1P23109 780 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 IL4RP24394 825 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 CD6P30203 668 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ACSL1P33121 698 aa9.49□□□□□ -0.89
BRCA1-219ENST00000491747 DHPSP49366 369 aaPredicted RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 SERPINH1P50454 418 aaKnown RBP9.49□□□□□ -0.89
BRCA1-219ENST00000491747 ARSEP51690 589 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms