RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 LIPIQ6XZB0 460 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 VSIG1Q86XK7 387 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 PHACTR4Q8IZ21 702 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 TEX26Q8N6G2 289 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 PQLC3Q8N755 202 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 LMX1AQ8TE12 382 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 RAPGEF5Q92565 580 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 NSMCE3Q96MG7 304 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 RNF157Q96PX1 679 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 SLC13A1Q9BZW2 595 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 LUC7LQ9NQ29 371 aaKnown RBP15.16■□□□□ 0.02
USP39-217ENST00000491659 SPASTQ9UBP0 616 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 B4GALT6Q9UBX8 382 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 PHTF1Q9UMS5 762 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 TTLL3Q9Y4R7 772 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 CSNK1G3Q9Y6M4 447 aa15.16■□□□□ 0.02
USP39-217ENST00000491659 RECQL5O94762 991 aaPredicted RBP15.15■□□□□ 0.02
USP39-217ENST00000491659 KRT10P13645 584 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 TNNT1P13805 278 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 CYLC1P35663 651 aaPredicted RBP15.15■□□□□ 0.02
USP39-217ENST00000491659 MAGEA1P43355 309 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
USP39-217ENST00000491659 BLKP51451 505 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 ZNF75DP51815 510 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 GBE1Q04446 702 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 NFATC4Q14934 902 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 ACOX1Q15067 660 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 SPA17Q15506 151 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 ARMC12Q5T9G4 340 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 FAXCQ5TGI0 409 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 LRRC38Q5VT99 294 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 TMPRSS12Q86WS5 348 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 RHOT1Q8IXI2 618 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 CCDC13Q8IYE1 715 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 CCDC170Q8IYT3 715 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 RBFAQ8N0V3 343 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 NDUFAF2Q8N183 169 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 MAML1Q92585 1016 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 FATE1Q969F0 183 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 HDAC11Q96DB2 347 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 TBATAQ96M53 351 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 TSGA13Q96PP4 275 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 IL12RB2Q99665 862 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 SEMA3CQ99985 751 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 MAK16Q9BXY0 300 aaKnown RBP15.15■□□□□ 0.02
USP39-217ENST00000491659 RBSNQ9H1K0 784 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 CAAP1Q9H8G2 361 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 USP29Q9HBJ7 922 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 DDX56Q9NY93 547 aaKnown RBP15.15■□□□□ 0.02
USP39-217ENST00000491659 AMACRQ9UHK6 382 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 KLF15Q9UIH9 416 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 EPG5Q9HCE0 2579 aa15.15■□□□□ 0.02
USP39-217ENST00000491659 FAM149AA5PLN7 773 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 A8MX80 341 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 K7ESM1 405 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 APOL1O14791 398 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 PGLSO95336 258 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 GIMD1P0DJR0 217 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 CKMT1AP12532 417 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 CCNB1P14635 433 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 ZFXP17010 805 aaPredicted RBP15.14■□□□□ 0.01
USP39-217ENST00000491659 CA4P22748 312 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 CES1P23141 567 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 VIPR1P32241 457 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 DUSP3P51452 185 aaPredicted RBP15.14■□□□□ 0.01
USP39-217ENST00000491659 PPARDQ03181 441 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 INPP5AQ14642 412 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 PRRT3Q5FWE3 981 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 ZCCHC8Q6NZY4 707 aaKnown RBP15.14■□□□□ 0.01
USP39-217ENST00000491659 USP45Q70EL2 814 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 CCNYQ8ND76 341 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 NUS1Q96E22 293 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 APOLD1Q96LR9 279 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 APOOQ9BUR5 198 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 LRRC61Q9BV99 259 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 RBM22Q9NW64 420 aaKnown RBP eCLIP15.14■□□□□ 0.01
USP39-217ENST00000491659 KCTD5Q9NXV2 234 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 DTLQ9NZJ0 730 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 NCKIPSDQ9NZQ3 722 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 KLQ9UEF7 1012 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 ZMIZ1Q9ULJ6 1067 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 OR1A2Q9Y585 309 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 RAI2Q9Y5P3 530 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 USP24Q9UPU5 2620 aa15.14■□□□□ 0.01
USP39-217ENST00000491659 KMT2BQ9UMN6 2715 aaPredicted RBP15.14■□□□□ 0.01
USP39-217ENST00000491659 CACNB4O00305 520 aaPredicted RBP15.13■□□□□ 0.01
USP39-217ENST00000491659 HEXIM1O94992 359 aaKnown RBP15.13■□□□□ 0.01
USP39-217ENST00000491659 RASGRP1O95267 797 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 IPO7O95373 1038 aaKnown RBP15.13■□□□□ 0.01
USP39-217ENST00000491659 LCA5LO95447 670 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 HLA-DQB2P05538 268 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 CTSEP14091 401 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 JUPP14923 745 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 COMTP21964 271 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 HADHBP55084 474 aaKnown RBP15.13■□□□□ 0.01
USP39-217ENST00000491659 E2F1Q01094 437 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 DSC2Q02487 901 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 ARHGEF7Q14155 803 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 CNGA3Q16281 694 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms