RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	SDK1	Q7Z5N4	2213 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	RGS16	O15492	202 aa	Predicted RBP	13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	INSIG1	O15503	277 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	CDH16	O75309	829 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	PMPCB	O75439	489 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	ZMPSTE24	O75844	475 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	ZNF806	P0C7X5	589 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	HLA-DPA1	P20036	260 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	DPP6	P42658	865 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	CSNK1D	P48730	415 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	RHOA	P61586	193 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	ST8SIA6	P61647	398 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	AP1S1	P61966	158 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	RAD51	Q06609	339 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	ZNF844	Q08AG5	666 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	MSS51	Q4VC12	460 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	FNDC3B	Q53EP0	1204 aa	Known RBP	13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	PITRM1	Q5JRX3	1037 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	PCID2	Q5JVF3	399 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	SPANXN3	Q5MJ09	141 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	LGSN	Q5TDP6	509 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	AGBL2	Q5U5Z8	902 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	PMS2CL	Q68D20	193 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	KIAA1211L	Q6NV74	962 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	LPCAT2	Q7L5N7	544 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	NLRP9	Q7RTR0	991 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	KDM1B	Q8NB78	822 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	PPHLN1	Q8NEY8	458 aa	Known RBP	13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	OR52K1	Q8NGK4	314 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	SPATA22	Q8NHS9	363 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	GSDMB	Q8TAX9	411 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	RLN3	Q8WXF3	142 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	ISG20	Q96AZ6	181 aa	Known RBP	13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	ALG14	Q96F25	216 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	PGM2	Q96G03	612 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	CFAP36	Q96G28	342 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	FEM1C	Q96JP0	617 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	LMLN	Q96KR4	655 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	FICD	Q9BVA6	458 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	ADGRE3	Q9BY15	652 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	CEP44	Q9C0F1	390 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	EPB41L4B	Q9H329	900 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	CENPH	Q9H3R5	247 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	FBRS	Q9HAH7	460 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	ARNT2	Q9HBZ2	717 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	UBP1	Q9NZI7	540 aa		13.59	□□□□□ -0.23
NUP188-208	ENST00000491502	DOCK4	Q8N1I0	1966 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	AGPS	O00116	658 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	AVIL	O75366	819 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	TMCC1	O94876	653 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	IGSF6	O95976	241 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	MT-CYB	P00156	380 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	FGF1	P05230	155 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	EPHX1	P07099	455 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	PAM	P19021	973 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	NDUFV2	P19404	249 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	MGAT1	P26572	445 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	CD70	P32970	193 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	ADRA1A	P35348	466 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	SERPINH1	P50454	418 aa	Known RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	SCNN1B	P51168	640 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	MAX	P61244	160 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	SNRPD1	P62314	119 aa	Known RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	ARF5	P84085	180 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	DSC2	Q02487	901 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	CDK18	Q07002	472 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	NAB1	Q13506	487 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	FRG1	Q14331	258 aa	Known RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	SPARCL1	Q14515	664 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	GRM3	Q14832	879 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	FASTKD3	Q14CZ7	662 aa	Known RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	RASA2	Q15283	850 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	CYTH1	Q15438	398 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	FUT11	Q495W5	492 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	KDELC1	Q6UW63	502 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	RANBP10	Q6VN20	620 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	ZNF534	Q76KX8	674 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	TAOK1	Q7L7X3	1001 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	PRPF39	Q86UA1	669 aa	Known RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	TDRP	Q86YL5	185 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	OR52K2	Q8NGK3	314 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	ARRDC2	Q8TBH0	407 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	WFDC5	Q8TCV5	224 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	SORCS1	Q8WY21	1168 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	TADA1	Q96BN2	335 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	MRGPRX2	Q96LB1	330 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	MRGPRX1	Q96LB2	322 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	SRPK1	Q96SB4	655 aa	Known RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	TMEM245	Q9H330	911 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	ACSS3	Q9H6R3	686 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	TMBIM4	Q9HC24	238 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	MRM3	Q9HC36	420 aa	Known RBP	13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	PARD6A	Q9NPB6	346 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	FAM53C	Q9NYF3	392 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	ABCA7	Q8IZY2	2146 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	FRYL	O94915	3013 aa		13.58	□□□□□ -0.24
NUP188-208	ENST00000491502	FAM237B	A0A1B0GVD1	139 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms