RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CDKN3Q16667 212 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 WSCD2Q2TBF2 565 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 DPPA4Q7L190 304 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 NPWQ8N729 165 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 DCBLD1Q8N8Z6 715 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 MAK16Q9BXY0 300 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 PCDH18Q9HCL0 1135 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 MBNL1Q9NR56 388 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 ABHD10Q9NUJ1 306 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 DNPEPQ9ULA0 475 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 PHTF1Q9UMS5 762 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 LAMA1P25391 3075 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 MFAP3LO75121 409 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 RECQL5O94762 991 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 ITIH2P19823 946 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 IL1R2P27930 398 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 GJC1P36383 396 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 ABCG1P45844 678 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 SRP54P61011 504 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 IFI16Q16666 785 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 C6orf132Q5T0Z8 1188 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 ARMC12Q5T9G4 340 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 EFL1Q7Z2Z2 1120 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 RNF214Q8ND24 703 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 HNRNPLLQ8WVV9 542 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 ECHDC3Q96DC8 303 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 DCBLD2Q96PD2 775 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 POLR1EQ9GZS1 481 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 WDR26Q9H7D7 661 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 GULP1Q9UBP9 304 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 AMACRQ9UHK6 382 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 MOSPD1Q9UJG1 213 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 NENFQ9UMX5 172 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 COQ6Q9Y2Z9 468 aa16.64■□□□□ 0.25
PDLIM2-217ENST00000491330 EME2A4GXA9 379 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 EIF4E1BA6NMX2 242 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 TMX2-CTNND1H3BSU7 103 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 TAF4O00268 1085 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 TNFRSF10CO14798 259 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 MUSKO15146 869 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 SPINT1O43278 529 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 MAFKO60675 156 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 TCEA3O75764 348 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 PROSCO94903 275 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 TSHRP16473 764 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 RBMS1P29558 406 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 BIRC2Q13490 618 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 C1orf61Q13536 156 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 LIPIQ6XZB0 460 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 CYP4V2Q6ZWL3 525 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 MARCH9Q86YJ5 346 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 RHOT2Q8IXI1 618 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 ARL10Q8N8L6 244 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 OR56A4Q8NGH8 313 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 FGF11Q92914 225 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 ZNF670Q9BS34 389 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 TRIM5Q9C035 493 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 PHPT1Q9NRX4 125 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 INTUQ9ULD6 942 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 PADI4Q9UM07 663 aa16.63■□□□□ 0.25
PDLIM2-217ENST00000491330 AKR1B15C9JRZ8 316 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 PSMD11O00231 422 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 YY2O15391 372 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 CAPNS1P04632 268 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 PYGLP06737 847 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 HOXC4P09017 264 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 TMEM253P0C7T8 217 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 VIPR1P32241 457 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 ARHGAP25P42331 645 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 RGRP47804 291 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 KIAA1024LP59773 190 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 ASTE1Q2TB18 679 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 RBM44Q6ZP01 1051 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 ARHGAP36Q6ZRI8 547 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 RBFAQ8N0V3 343 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 CCNYQ8ND76 341 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 SPOCK2Q92563 424 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 NUS1Q96E22 293 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 BTBD6Q96KE9 485 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 MGME1Q9BQP7 344 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 LRRC61Q9BV99 259 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 SYNDIG1Q9H7V2 258 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 NT5MQ9NPB1 228 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 LUC7LQ9NQ29 371 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 GPR34Q9UPC5 381 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 GPSM3Q9Y4H4 160 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 TTLL3Q9Y4R7 772 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 OR1A2Q9Y585 309 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 PCDHGC4Q9Y5F7 938 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 TMEM131Q92545 1883 aa16.62■□□□□ 0.25
PDLIM2-217ENST00000491330 A0A087WV48 116 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 GOLGA6CA6NDK9 693 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 GOLGA6BA6NDN3 693 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 TRAFD1O14545 582 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 MATN3O15232 486 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 HTRA2O43464 458 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 USP12O75317 370 aa16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 CSO75390 466 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-217ENST00000491330 PRKCGP05129 697 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms