RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 APBB3O95704 486 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 CYP2A6P11509 494 aaPredicted RBP18.71■□□□□ 0.59
MCF2L-230ENST00000491028 P2RY2P41231 377 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 ELP6Q0PNE2 266 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 CNTN1Q12860 1018 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 ERAP2Q6P179 960 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 CENPUQ71F23 418 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 TTC7BQ86TV6 843 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 RASSF3Q86WH2 238 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 HDDC3Q8N4P3 179 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 LRRC39Q96DD0 335 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 OMDQ99983 421 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 IL22Q9GZX6 179 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 SLC6A17Q9H1V8 727 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 TRABDQ9H4I3 376 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 C2orf42Q9NWW7 574 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 BCCIPQ9P287 314 aaKnown RBP eCLIP18.71■□□□□ 0.59
MCF2L-230ENST00000491028 NFU1Q9UMS0 254 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 NCKAP1Q9Y2A7 1128 aa18.71■□□□□ 0.59
MCF2L-230ENST00000491028 A0A1W2PP55 124 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 E7ESA3 106 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 AP1G1O43747 822 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 CTPS1P17812 591 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 ABL2P42684 1182 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 SESN2P58004 480 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-230ENST00000491028 VSNL1P62760 191 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 MSLNQ13421 630 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-230ENST00000491028 LAMB3Q13751 1172 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 ELF2Q15723 593 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 PIP5KL1Q5T9C9 394 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 AGBL4Q5VU57 503 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 ANO7Q6IWH7 933 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 DPPA4Q7L190 304 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 PGBD3Q8N328 593 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 MDGA1Q8NFP4 955 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 PBXIP1Q96AQ6 731 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 HHIPQ96QV1 700 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 RANBP9Q96S59 729 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 PCDH12Q9NPG4 1184 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 PIH1D1Q9NWS0 290 aaKnown RBP18.7■□□□□ 0.58
MCF2L-230ENST00000491028 FBXL12Q9NXK8 326 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 USP36Q9P275 1121 aaKnown RBP18.7■□□□□ 0.58
MCF2L-230ENST00000491028 RAB21Q9UL25 225 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 BDP1A6H8Y1 2624 aa18.7■□□□□ 0.58
MCF2L-230ENST00000491028 SDR42E2A6NKP2 422 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 TNFRSF10AO00220 468 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 AREL1O15033 823 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 AVILO75366 819 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 RNASEH2AO75792 299 aaKnown RBP18.69■□□□□ 0.58
MCF2L-230ENST00000491028 IGLV3-19P01714 112 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 ALPIP09923 528 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 ZNF30P17039 623 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 MGAT1P26572 445 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 VIPR1P32241 457 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 HNF1BP35680 557 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 MMP12P39900 470 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 FNBP1LQ5T0N5 605 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 CERCAMQ5T4B2 595 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 CCNI2Q6ZMN8 369 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-230ENST00000491028 GLT6D1Q7Z4J2 308 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 FBXL6Q8N531 539 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 BRSK1Q8TDC3 778 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 BLOC1S5Q8TDH9 187 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 GANCQ8TET4 914 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 PTCD2Q8WV60 388 aaKnown RBP18.69■□□□□ 0.58
MCF2L-230ENST00000491028 PARD6BQ9BYG5 372 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 ITM2CQ9NQX7 267 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 SPATA6Q9NWH7 488 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-230ENST00000491028 SAMD15Q9P1V8 674 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 B4GALT6Q9UBX8 382 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 ZNF711Q9Y462 761 aa18.69■□□□□ 0.58
MCF2L-230ENST00000491028 HEATR9A2RTY3 570 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 NPIPB15A6NHN6 443 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-230ENST00000491028 ZNF217O75362 1048 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 CRTAMO95727 393 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 TPH1P17752 444 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 ADRA1DP25100 572 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 PDE1BQ01064 536 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 DHX9Q08211 1270 aaKnown RBP18.68■□□□□ 0.58
MCF2L-230ENST00000491028 NAA30Q147X3 362 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-230ENST00000491028 POU6F1Q14863 301 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 BBS9Q3SYG4 887 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 PCID2Q5JVF3 399 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-230ENST00000491028 PPHLN1Q8NEY8 458 aaKnown RBP18.68■□□□□ 0.58
MCF2L-230ENST00000491028 SIGLEC10Q96LC7 697 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 PWWP2AQ96N64 755 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 NAT9Q9BTE0 207 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 KDM4CQ9H3R0 1056 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 MRM3Q9HC36 420 aaKnown RBP18.68■□□□□ 0.58
MCF2L-230ENST00000491028 PRMT8Q9NR22 394 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-230ENST00000491028 SYBUQ9NX95 663 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.68■□□□□ 0.58
MCF2L-230ENST00000491028 SERGEFQ9UGK8 458 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 EBF1Q9UH73 591 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 TCAF1Q9Y4C2 921 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 SPO11Q9Y5K1 396 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 FADS3Q9Y5Q0 445 aa18.68■□□□□ 0.58
MCF2L-230ENST00000491028 C1orf232A0A0U1RR37 186 aa18.67■□□□□ 0.58
MCF2L-230ENST00000491028 MAGEB16A2A368 324 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms