RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	KDELC1	Q6UW63	502 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	RINL	Q6ZS11	566 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	LRRC8D	Q7L1W4	858 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	GPRIN1	Q7Z2K8	1008 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	SCD5	Q86SK9	330 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ITIH5	Q86UX2	942 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ALYREF	Q86V81	257 aa	Known RBP	6.37	□□□□□ -1.39
FN1-223	ENST00000490833	LRRTM3	Q86VH5	581 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	GALNT13	Q8IUC8	556 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	NPAS4	Q8IUM7	802 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	TMEM151A	Q8N4L1	468 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ICA1L	Q8NDH6	482 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	C3orf58	Q8NDZ4	430 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	TRPV1	Q8NER1	839 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ADCY4	Q8NFM4	1077 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	OR10T2	Q8NGX3	314 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	OR6P1	Q8NGX9	317 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	TRIB2	Q92519	343 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	NDRG1	Q92597	394 aa	Known RBP	6.37	□□□□□ -1.39
FN1-223	ENST00000490833	CASP10	Q92851	521 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	LPP	Q93052	612 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	TADA1	Q96BN2	335 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	L3HYPDH	Q96EM0	354 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ZNF333	Q96JL9	665 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	MAEL	Q96JY0	434 aa	Known RBP	6.37	□□□□□ -1.39
FN1-223	ENST00000490833	UBXN10	Q96LJ8	280 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	MAGEB10	Q96LZ2	347 aa	Predicted RBP	6.37	□□□□□ -1.39
FN1-223	ENST00000490833	RPRD1A	Q96P16	312 aa	Predicted RBP	6.37	□□□□□ -1.39
FN1-223	ENST00000490833	PSKH2	Q96QS6	385 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	SORT1	Q99523	831 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	LPIN3	Q9BQK8	851 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	MECR	Q9BV79	373 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	GATA5	Q9BWX5	397 aa	Predicted RBP	6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ARHGAP39	Q9C0H5	1083 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	KLHL4	Q9C0H6	718 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	CXCL16	Q9H2A7	254 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	UGT1A7	Q9HAW7	530 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	UGT1A10	Q9HAW8	530 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	UGT1A8	Q9HAW9	530 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ZBTB26	Q9HCK0	441 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	S100A14	Q9HCY8	104 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	GID8	Q9NWU2	228 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ZDHHC7	Q9NXF8	308 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	TRPM5	Q9NZQ8	1165 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	THEG	Q9P2T0	379 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ZMYM5	Q9UJ78	669 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	CDH22	Q9UJ99	828 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ABT1	Q9ULW3	272 aa	Known RBP	6.37	□□□□□ -1.39
FN1-223	ENST00000490833	PLA2G4C	Q9UP65	541 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	PHF24	Q9UPV7	400 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	NDUFAF1	Q9Y375	327 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	ASB3	Q9Y575	518 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	PSAT1	Q9Y617	370 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	TRIP11	Q15643	1979 aa		6.37	□□□□□ -1.39
FN1-223	ENST00000490833	MGAM	O43451	1857 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833		A0A088AWK7	358 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	CCDC195	A0A1B0GUA6	201 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833		A0A1B0GVM2	712 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	TCAF2	A6NFQ2	919 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	FAM155A	B1AL88	458 aa	Predicted RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	TARM1	B6A8C7	271 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	ZNF195	O14628	629 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	UBD	O15205	165 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	CD3EAP	O15446	510 aa	Known RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	DCX	O43602	365 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	HCRT	O43612	131 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	KDELR3	O43731	214 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	ACSL4	O60488	711 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	PMPCB	O75439	489 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	ARHGEF15	O94989	841 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	PIGN	O95427	931 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	FGF19	O95750	216 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	C1R	P00736	705 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	RPSA	P08865	295 aa	Known RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	CPOX	P36551	454 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	ALDH1A3	P47895	512 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	MRPL19	P49406	292 aa	Known RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	SUOX	P51687	545 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	INHBC	P55103	352 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	HERVK_113	P63132	956 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	PITX1	P78337	314 aa	Predicted RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	PFKP	Q01813	784 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	RAD51	Q06609	339 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	FOXM1	Q08050	763 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	TBL3	Q12788	808 aa	Known RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	SF3A3	Q12874	501 aa	Known RBP eCLIP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	MTM1	Q13496	603 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	SEPT6	Q14141	434 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	TAF1A	Q15573	450 aa	Predicted RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	KCTD19	Q17RG1	926 aa	Predicted RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	SMU1	Q2TAY7	513 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	MMEL1	Q495T6	779 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	ACSBG2	Q5FVE4	666 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	ARL13A	Q5H913	290 aa	Predicted RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	CDKL4	Q5MAI5	379 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	SAMD4B	Q5PRF9	694 aa	Known RBP	6.36	□□□□□ -1.39
FN1-223	ENST00000490833	ADGRF1	Q5T601	910 aa		6.36	□□□□□ -1.39
FN1-223	ENST00000490833	FAM171A1	Q5VUB5	890 aa		6.36	□□□□□ -1.39

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