RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 PPP2R2BQ00005 443 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 ITGADQ13349 1161 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 LSM12Q3MHD2 195 aaKnown RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 ZNF296Q8WUU4 475 aaPredicted RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 SLC35F5Q8WV83 523 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 KHSRPQ92945 711 aaKnown RBP eCLIP10.23□□□□□ -0.77
BRD9-209ENST00000490814 C12orf43Q96C57 262 aaKnown RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 CELF6Q96J87 481 aaKnown RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 CPNE1Q99829 537 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 AIFM2Q9BRQ8 373 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 NOL11Q9H8H0 719 aaKnown RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 LRRC40Q9H9A6 602 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 EFCAB1Q9HAE3 211 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 C12orf10Q9HB07 376 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 FAM155AB1AL88 458 aaPredicted RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 TMEM233B4DJY2 109 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 J3QRK9 145 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 AKAP10O43572 662 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 FLT3LGP49771 235 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 NDUFV1P49821 464 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 HSPA14Q0VDF9 509 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 ARL13AQ5H913 290 aaPredicted RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 TIFABQ6ZNK6 161 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 CTU1Q7Z7A3 348 aaKnown RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 KCNMB4Q86W47 210 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 SPARTQ8N0X7 666 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 TTC16Q8NEE8 873 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 AFG1LQ8WV93 481 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 KCTD4Q8WVF5 259 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 ARNTL2Q8WYA1 636 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 GLMNQ92990 594 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 FBXL8Q96CD0 374 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 DHRS9Q9BPW9 319 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 ACE2Q9BYF1 805 aaPredicted RBP10.23□□□□□ -0.77
BRD9-209ENST00000490814 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
BRD9-209ENST00000490814 CLOCKO15516 846 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 SGTAO43765 313 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 MYO1DO94832 1006 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 CTRB1P17538 263 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 MAGEA3P43357 314 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 ZNF135P52742 658 aaPredicted RBP10.22□□□□□ -0.77
BRD9-209ENST00000490814 TPTEP56180 551 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 TPI1P60174 286 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 IFITM2Q01629 132 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 BST2Q10589 180 aaKnown RBP10.22□□□□□ -0.77
BRD9-209ENST00000490814 TTLL4Q14679 1199 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 GRTP1Q5TC63 336 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 CTRB2Q6GPI1 263 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 EPGNQ6UW88 154 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 VPS39Q96JC1 886 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 C17orf80Q9BSJ5 609 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 MTMR10Q9NXD2 777 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 DAPK2Q9UIK4 370 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 KCNH4Q9UQ05 1017 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 LAMA2P24043 3122 aaKnown RBP10.22□□□□□ -0.77
BRD9-209ENST00000490814 PLOD2O00469 737 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 CA12O43570 354 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 IDH3BO43837 385 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 NOL3O60936 208 aaKnown RBP10.22□□□□□ -0.77
BRD9-209ENST00000490814 C22orf31O95567 290 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 JCHAINP01591 159 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 PLK1P53350 603 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 BCAT1P54687 386 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 CCL14Q16627 93 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 DGKDQ16760 1214 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 PIGZQ86VD9 579 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 RIOX2Q8IUF8 465 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 CADM3Q8N126 398 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 BEST2Q8NFU1 509 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 C12orf42Q96LP6 360 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 RBBP8Q99708 897 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 SLC29A1Q99808 456 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 NAT9Q9BTE0 207 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 SIK2Q9H0K1 926 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 CDYLQ9Y232 598 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 SNX10Q9Y5X0 201 aa10.22□□□□□ -0.77
BRD9-209ENST00000490814 CCRL2O00421 344 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 RSL1D1O76021 490 aaKnown RBP10.21□□□□□ -0.77
BRD9-209ENST00000490814 VAPBO95292 243 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 FKBP9O95302 570 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 KRT6AP02538 564 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 KRT6BP04259 564 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 IL32P24001 234 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 SLC12A2P55011 1212 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 DSTNP60981 165 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 CHRNEQ04844 493 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 INCA1Q0VD86 236 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 IKBKEQ14164 716 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 POU6F1Q14863 301 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 LRRC8EQ6NSJ5 796 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 PLPPR4Q7Z2D5 763 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 GALNT7Q86SF2 657 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 RALGPS2Q86X27 583 aaPredicted RBP10.21□□□□□ -0.77
BRD9-209ENST00000490814 ELMOD2Q8IZ81 293 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 EXT2Q93063 718 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 VPS35Q96QK1 796 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 FERD3LQ96RJ6 166 aa10.21□□□□□ -0.77
BRD9-209ENST00000490814 RSPH9Q9H1X1 276 aaPredicted RBP10.21□□□□□ -0.77
BRD9-209ENST00000490814 ATXN3LQ9H3M9 355 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms