RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 M0R296 226 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 MID1O15344 667 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 AP1G1O43747 822 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 SPAG6O75602 509 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 PAPSS2O95340 614 aaPredicted RBP13.3□□□□□ -0.28
SNX12-205ENST00000490561 UQCRHP07919 91 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 GSTA2P09210 222 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 ADRB3P13945 408 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 TIMP2P16035 220 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 ZNF30P17039 623 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 COL9A1P20849 921 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 MGAT1P26572 445 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 CHRNA4P43681 627 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 CLCN5P51795 746 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 DHX9Q08211 1270 aaKnown RBP13.3□□□□□ -0.28
SNX12-205ENST00000490561 OLIG2Q13516 323 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 TAF1AQ15573 450 aaPredicted RBP13.3□□□□□ -0.28
SNX12-205ENST00000490561 KIAA1211LQ6NV74 962 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 CASC4Q6P4E1 433 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 TRMT10CQ7L0Y3 403 aaKnown RBP13.3□□□□□ -0.28
SNX12-205ENST00000490561 PARS2Q7L3T8 475 aaKnown RBP13.3□□□□□ -0.28
SNX12-205ENST00000490561 GLT6D1Q7Z4J2 308 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 TTC7BQ86TV6 843 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 CCDC25Q86WR0 208 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 CAMKK1Q8N5S9 505 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 BLOC1S5Q8TDH9 187 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 AENQ8WTP8 325 aaKnown RBP13.3□□□□□ -0.28
SNX12-205ENST00000490561 PYROXD1Q8WU10 500 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 CAVIN3Q969G5 261 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 ARRDC3Q96B67 414 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 STAMBPL1Q96FJ0 436 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 EBNA1BP2Q99848 306 aaKnown RBP13.3□□□□□ -0.28
SNX12-205ENST00000490561 OMDQ99983 421 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 FZD4Q9ULV1 537 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 SOX13Q9UN79 622 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 TCAF1Q9Y4C2 921 aa13.3□□□□□ -0.28
SNX12-205ENST00000490561 FAM237BA0A1B0GVD1 139 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 AVILO75366 819 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 APBB3O95704 486 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 POLBP06746 335 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 PGAM1P18669 254 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 PAMP19021 973 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 AOC1P19801 751 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 VIPR1P32241 457 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 MAGEA4P43358 317 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 CCR3P51677 355 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 ARHGEF7Q14155 803 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 NAA30Q147X3 362 aaPredicted RBP13.29□□□□□ -0.28
SNX12-205ENST00000490561 POU6F1Q14863 301 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 CERCAMQ5T4B2 595 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 CWF19L1Q69YN2 538 aaKnown RBP13.29□□□□□ -0.28
SNX12-205ENST00000490561 PKN3Q6P5Z2 889 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 DPPA4Q7L190 304 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 ZSWIM9Q86XI8 627 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 ZBED8Q8IZ13 594 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 HDDC3Q8N4P3 179 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 HNRNPLLQ8WVV9 542 aaKnown RBP13.29□□□□□ -0.28
SNX12-205ENST00000490561 FAM131CQ96AQ9 280 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 MRGPRX1Q96LB2 322 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 SIGLEC10Q96LC7 697 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 KIFC1Q9BW19 673 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 GPR63Q9BZJ6 419 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 MKRN2Q9H000 416 aaKnown RBP13.29□□□□□ -0.28
SNX12-205ENST00000490561 KDM4CQ9H3R0 1056 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 PCDH12Q9NPG4 1184 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 RAD18Q9NS91 495 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 SYBUQ9NX95 663 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 KCTD5Q9NXV2 234 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNX12-205ENST00000490561 BCCIPQ9P287 314 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNX12-205ENST00000490561 ZNF711Q9Y462 761 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 MAD1L1Q9Y6D9 718 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 TEX264Q9Y6I9 313 aa13.29□□□□□ -0.28
SNX12-205ENST00000490561 RGSL1A5PLK6 1076 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 H0Y858 1186 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 PSMD11O00231 422 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 TSPAN6O43657 245 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 ZNF217O75362 1048 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 RNASEH2AO75792 299 aaKnown RBP13.28□□□□□ -0.28
SNX12-205ENST00000490561 MYBL2P10244 700 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 TPH1P17752 444 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 CTPS1P17812 591 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 GABRG2P18507 467 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 NDUFV2P19404 249 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 LPOP22079 712 aaPredicted RBP13.28□□□□□ -0.28
SNX12-205ENST00000490561 OXTRP30559 389 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 PHBP35232 272 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 HNF1BP35680 557 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 MMP12P39900 470 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 P2RY2P41231 377 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 ELK3P41970 407 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 CNTN1Q12860 1018 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 MSLNQ13421 630 aaPredicted RBP13.28□□□□□ -0.28
SNX12-205ENST00000490561 SEPT6Q14141 434 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 FRG1Q14331 258 aaKnown RBP13.28□□□□□ -0.28
SNX12-205ENST00000490561 GAS6Q14393 721 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 SKIDA1Q1XH10 827 aa13.28□□□□□ -0.28
SNX12-205ENST00000490561 TMEM52BQ4KMG9 183 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms