RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 IKZF4Q9H2S9 585 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 MFSD1Q9H3U5 465 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 MS4A5Q9H3V2 200 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 FAM204AQ9H8W3 233 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 CYP3A43Q9HB55 503 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 PARPBPQ9NWS1 579 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 DLL3Q9NYJ7 618 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 GDE1Q9NZC3 331 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 IGSF9Q9P2J2 1179 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 TRIM10Q9UDY6 481 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 LCMT1Q9UIC8 334 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 SH3BP1Q9Y3L3 701 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 JRKLQ9Y4A0 524 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 INSL5Q9Y5Q6 135 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 HECTD1Q9ULT8 2610 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 TECTAO75443 2155 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 TRIM49BA6NDI0 452 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 GOLGA8KD6RF30 607 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 P4HA2O15460 535 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 PRAMEF4O60810 478 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 LCA5LO95447 670 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 HLA-DRAP01903 254 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 RHOP08100 348 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 PDGFRBP09619 1106 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 LTA4HP09960 611 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 WEE2P0C1S8 567 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 CSH1P0DML2 217 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 CSH2P0DML3 217 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 MYL4P12829 197 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 WARSP23381 471 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SP100P23497 879 aaPredicted RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 AVPR1AP37288 418 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 MTIF2P46199 727 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 PPP3CCP48454 512 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 MAN2A2P49641 1150 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 CASP4P49662 377 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 MYL6P60660 151 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 NOP14P78316 857 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 TDGQ13569 410 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SOWAHAQ2M3V2 549 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 CFAP221Q4G0U5 840 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 DNAJC21Q5F1R6 531 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 PITRM1Q5JRX3 1037 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SCARA5Q6ZMJ2 495 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 UNC93AQ86WB7 457 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SCN4BQ8IWT1 228 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 ATAD1Q8NBU5 361 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 B3GALNT2Q8NCR0 500 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 STKLD1Q8NE28 680 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 TRIM58Q8NG06 486 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 FAM76AQ8TAV0 307 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 MYCBPAPQ8TBZ2 947 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 AENQ8WTP8 325 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 MRPS31Q92665 395 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SECISBP2LQ93073 1101 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 PSMG2Q969U7 264 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 EEF2KMTQ96G04 330 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 AHCYL2Q96HN2 611 aaKnown RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 NT5C1BQ96P26 610 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SLITRK1Q96PX8 696 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SH3GL2Q99962 352 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SYT15Q9BQS2 421 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 TUBGCP2Q9BSJ2 902 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 CRACR2AQ9BSW2 395 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SELENOOQ9BVL4 669 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 EDEM3Q9BZQ6 932 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 POMKQ9H5K3 350 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 NHEJ1Q9H9Q4 299 aaPredicted RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 RAB20Q9NX57 234 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 ING3Q9NXR8 418 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 HECAQ9UBI9 543 aaPredicted RBP4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SIX4Q9UIU6 781 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 CDH7Q9ULB5 785 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SNX12Q9UMY4 172 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 SORCS3Q9UPU3 1222 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 CLCA2Q9UQC9 943 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 YIPF1Q9Y548 306 aa4.88□□□□□ -1.63
CSTF1-205ENST00000490539 LOC400499M0QZD8 3231 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 A0A087WUV0 522 aaPredicted RBP4.87□□□□□ -1.63
CSTF1-205ENST00000490539 MTMR11A4FU01 709 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 LOC730098B7Z3J9 87 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 AGPSO00116 658 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 GABRDO14764 452 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 PPEF2O14830 753 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 PJA2O43164 708 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 ADAM12O43184 909 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 TBC1D4O60343 1298 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 SRGAP2O75044 1071 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 FZD7O75084 574 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 PHF2O75151 1096 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 RTN3O95197 1032 aaPredicted RBP4.87□□□□□ -1.63
CSTF1-205ENST00000490539 ASS1P00966 412 aaKnown RBP4.87□□□□□ -1.63
CSTF1-205ENST00000490539 AFPP02771 609 aaKnown RBP4.87□□□□□ -1.63
CSTF1-205ENST00000490539 LPLP06858 475 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 OR4Q2P0C623 313 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 TRIM49P0CI25 452 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 TRIM49CP0CI26 452 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 LAMP2P13473 410 aa4.87□□□□□ -1.63
CSTF1-205ENST00000490539 TCP1P17987 556 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms