RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ATXN7L2Q5T6C5 722 aaPredicted RBP13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 TCERG1LQ5VWI1 586 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 TMEM71Q6P5X7 295 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 GDPD4Q6W3E5 623 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 NRROSQ86YC3 692 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 PLPP6Q8IY26 295 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 ESX1Q8N693 406 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 Q8NA96 180 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 C19orf60Q96EN9 201 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 SLC2A13Q96QE2 648 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 ZMYND15Q9H091 742 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 SUDS3Q9H7L9 328 aaPredicted RBP13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 RRN3Q9NYV6 651 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 SERTAD1Q9UHV2 236 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 CROTQ9UKG9 612 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 ITGB1BP2Q9UKP3 347 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 ENTPD4Q9Y227 616 aa13.76□□□□□ -0.21
EXOSC3-207ENST00000490516 ILVBLA1L0T0 632 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 KRT86O43790 486 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 DIAPH2O60879 1101 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 POP4O95707 220 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 LEPRP48357 1165 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 BIRC2Q13490 618 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 MTM1Q13496 603 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 SQSTM1Q13501 440 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 SEMA5AQ13591 1074 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 MYLK3Q32MK0 819 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 DCAF17Q5H9S7 520 aaPredicted RBP13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 LEKR1Q6ZMV7 388 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 TMEM110Q86TL2 294 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 APLFQ8IW19 511 aaPredicted RBP13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 OR2AP1Q8NGE2 309 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 ISG20Q96AZ6 181 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 PAGE5Q96GU1 130 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 ZPBPQ9BS86 351 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 OSBPL1AQ9BXW6 950 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 MFRPQ9BY79 579 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 TWSG1Q9GZX9 223 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 FBXO8Q9NRD0 319 aa13.75□□□□□ -0.21
EXOSC3-207ENST00000490516 CBX6O95503 412 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 GSRP00390 522 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 CCNB1P14635 433 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 SYT1P21579 422 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 MAN1A1P33908 653 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 KIAA1024LP59773 190 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 GNA12Q03113 381 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 MTA1Q13330 715 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 ZXDCQ2QGD7 858 aaPredicted RBP13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 ARTNQ5T4W7 220 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 SP5Q6BEB4 398 aaPredicted RBP13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 JMJD6Q6NYC1 403 aaPredicted RBP13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 XYLT1Q86Y38 959 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 CEP57L1Q8IYX8 460 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 STK32AQ8WU08 396 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 DPYSL5Q9BPU6 564 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 SLC25A23Q9BV35 468 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 LGR4Q9BXB1 951 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 TKTL2Q9H0I9 626 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 TAAR2Q9P1P5 351 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 ZNF212Q9UDV6 495 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 CCDC168Q8NDH2 2452 aa13.74□□□□□ -0.21
EXOSC3-207ENST00000490516 PIPSLA2A3N6 862 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 A6NCN8 305 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 CACNB4O00305 520 aaPredicted RBP13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 INPP4BO15327 924 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ZNF28P17035 718 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 AK4P27144 223 aaPredicted RBP13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ACVRL1P37023 503 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 PPM1FP49593 454 aaPredicted RBP13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 SNRPD1P62314 119 aaKnown RBP13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 CHAF1BQ13112 559 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 MAP7Q14244 749 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 POLD3Q15054 466 aaPredicted RBP13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ZCWPW2Q504Y3 356 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ZRANB3Q5FWF4 1079 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 OTUD1Q5VV17 481 aaPredicted RBP13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 CPZQ66K79 652 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ZNF783Q6ZMS7 281 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ARHGAP22Q7Z5H3 698 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ZNF761Q86XN6 746 aaPredicted RBP13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 DRC7Q8IY82 874 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 NAGSQ8N159 534 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ARHGEF2Q92974 986 aaKnown RBP13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 MLXIPLQ9NP71 852 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 SLAMF7Q9NQ25 335 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 ARHGEF38Q9NXL2 777 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 PDP2Q9P2J9 529 aa13.73□□□□□ -0.21
EXOSC3-207ENST00000490516 IGLV3-10A0A075B6K4 115 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 A0A1B0GTL3 188 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 PRSS38A1L453 326 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 TNFRSF10CO14798 259 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 POLR1CO15160 346 aaPredicted RBP13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 ACTN4O43707 911 aaKnown RBP13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 SRGAP2O75044 1071 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 CREG1O75629 220 aa13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 EPB41P11171 864 aaKnown RBP13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 TFE3P19532 575 aaPredicted RBP13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 XPAP23025 273 aaPredicted RBP13.72□□□□□ -0.21
EXOSC3-207ENST00000490516 NOP2P46087 812 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms