RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 FUCA1P04066 466 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 PNLIPP16233 465 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 ITIH1P19827 911 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 RGRP47804 291 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 INHBCP55103 352 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 GSCP56915 257 aaPredicted RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 GEMIN4P57678 1058 aaKnown RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 YBEYP58557 167 aaPredicted RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 SRSF1Q07955 248 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMG5-205ENST00000489907 RALGDSQ12967 914 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 EIF3IQ13347 325 aaKnown RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 SERINC3Q13530 473 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 NFATC4Q14934 902 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 LRRC14Q15048 493 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 UGP2Q16851 508 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 CDO1Q16878 200 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 FKBP15Q5T1M5 1219 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 RWDD4Q6NW29 188 aaKnown RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 ESRP1Q6NXG1 681 aaKnown RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 ENPP7Q6UWV6 458 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 XKR5Q6UX68 686 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 ZNF574Q6ZN55 896 aaPredicted RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 TMEM139Q8IV31 216 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 SLITRK4Q8IW52 837 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 UMODL1-AS1Q8N2C9 162 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 FSTL5Q8N475 847 aaPredicted RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 RYBPQ8N488 228 aaPredicted RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 FBXO39Q8N4B4 442 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 RTL3Q8N8U3 475 aaKnown RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 HTR3CQ8WXA8 447 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 CASKIN2Q8WXE0 1202 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 EXTL1Q92935 676 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 PDXPQ96GD0 296 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 DNAJC7Q99615 494 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 SEMA3CQ99985 751 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 WRAP53Q9BUR4 548 aaKnown RBP8.21□□□□□ -1.1
SMG5-205ENST00000489907 LRRN3Q9H3W5 708 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 SUV39H2Q9H5I1 410 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 AIPL1Q9NZN9 384 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 IL17BQ9UHF5 180 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 MYO6Q9UM54 1294 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 DAAM1Q9Y4D1 1078 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 OR1A2Q9Y585 309 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 ST14Q9Y5Y6 855 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 DGKBQ9Y6T7 804 aa8.21□□□□□ -1.1
SMG5-205ENST00000489907 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 ZSCAN5CA6NGD5 496 aaPredicted RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 J3KR12 359 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 ARHGAP6O43182 974 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 BUB1O43683 1085 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 RASGRP1O95267 797 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 PIGNO95427 931 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 ITGB2P05107 769 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 RPLP0P05388 317 aaKnown RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 ALPIP09923 528 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 LIPCP11150 499 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 GLB1P16278 677 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 CASP14P31944 242 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 TRIM23P36406 574 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 LIG3P49916 1009 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 CSRP3P50461 194 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 BLKP51451 505 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 SUOXP51687 545 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 SRP54P61011 504 aaKnown RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 POLR2FP61218 127 aaKnown RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 ZBED6P86452 979 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 NFKB2Q00653 900 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 B4GALNT1Q00973 533 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 CDR2Q01850 454 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 NFATC3Q12968 1075 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 RAPGEF1Q13905 1077 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 HLTFQ14527 1009 aaKnown RBP eCLIP8.2□□□□□ -1.11e-6■□□□□ 8.3
SMG5-205ENST00000489907 ELOCQ15369 112 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 PPP1R15BQ5SWA1 713 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 CERCAMQ5T4B2 595 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 HGSNATQ68CP4 663 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 ZNF677Q86XU0 584 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 HID1Q8IV36 788 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 CBARPQ8N350 705 aaPredicted RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 CCL4L1Q8NHW4 92 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 SLC30A5Q8TAD4 765 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 CXorf40AQ8TE69 158 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 FAM172AQ8WUF8 416 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 OR1E3Q8WZA6 343 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 SYN2Q92777 582 aaPredicted RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 ECHDC3Q96DC8 303 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 TBC1D31Q96DN5 1066 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 IQCDQ96DY2 449 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 SGF29Q96ES7 293 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 HMCESQ96FZ2 354 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 EXOC2Q96KP1 924 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 GDAP1L1Q96MZ0 367 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 TMEM74Q96NL1 305 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 GFM1Q96RP9 751 aaKnown RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 LGR4Q9BXB1 951 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 PDCL3Q9H2J4 239 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 LRRC19Q9H756 370 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 EPB41L5Q9HCM4 733 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 FGF22Q9HCT0 170 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms