RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	YPEL5	P62699	121 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	KIF5A	Q12840	1032 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	TRAF2	Q12933	501 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	RALGDS	Q12967	914 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	FZD2	Q14332	565 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	AGER	Q15109	404 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	TAZ	Q16635	292 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	HS1BP3	Q53T59	392 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	TFDP3	Q5H9I0	405 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	KAZN	Q674X7	775 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	ALG1L	Q6GMV1	187 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	NPNT	Q6UXI9	565 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	SPOCD1	Q6ZMY3	1216 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	USP45	Q70EL2	814 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	PARG	Q86W56	976 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	TMEM139	Q8IV31	216 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	CCDC50	Q8IVM0	306 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	EID2	Q8N6I1	236 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	EXD1	Q8NHP7	514 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	KIAA1524	Q8TCG1	905 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	OLFM3	Q96PB7	478 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	LACRT	Q9GZZ8	138 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	MBNL1	Q9NR56	388 aa	Known RBP	11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	B4GALT6	Q9UBX8	382 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	SALL4	Q9UJQ4	1053 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	APOBEC2	Q9Y235	224 aa	Known RBP	11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	COQ6	Q9Y2Z9	468 aa		11.14	□□□□□ -0.63
GGA1-222	ENST00000489772	ASCC3	Q8N3C0	2202 aa	Known RBP	11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	KNL1	Q8NG31	2342 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	NEMP2	A6NFY4	417 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772		A8MX80	341 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772		H3BM21	787 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	RECQL5	O94762	991 aa	Predicted RBP	11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	LDOC1	O95751	146 aa	Predicted RBP	11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	CYP2A6	P11509	494 aa	Predicted RBP	11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	NME1	P15531	152 aa	Known RBP	11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	TGM2	P21980	687 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	DGKA	P23743	735 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	HTR1B	P28222	390 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	CTNNA1	P35221	906 aa	Known RBP	11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	IGFALS	P35858	605 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	MARCKSL1	P49006	195 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	PEX5	P50542	639 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.13	□□□□□ -0.63	5e-7	■■■□□ 15.6
GGA1-222	ENST00000489772	IFI35	P80217	286 aa	Predicted RBP	11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	SHC2	P98077	582 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	DSC2	Q02487	901 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	ACOX1	Q15067	660 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	IRF4	Q15306	451 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	LLGL1	Q15334	1064 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	WSCD2	Q2TBF2	565 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	LIPI	Q6XZB0	460 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	KRT35	Q92764	455 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	P3H4	Q92791	437 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	SCRN2	Q96FV2	425 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	CNDP2	Q96KP4	475 aa	Known RBP	11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	DESI2	Q9BSY9	194 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	SEPT10	Q9P0V9	454 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	PCDHA3	Q9Y5H8	950 aa		11.13	□□□□□ -0.63
GGA1-222	ENST00000489772	ADAMTS9	Q9P2N4	1935 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	hCG_1818297	A0A087WSY0	165 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	CCDC66	A2RUB6	948 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	GOLGA8CP	A6NN73	597 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	FZD6	O60353	706 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	PIAS2	O75928	621 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	HEXIM1	O94992	359 aa	Known RBP	11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	PCCB	P05166	539 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	ATXN1L	P0C7T5	689 aa	Known RBP	11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	ALPPL2	P10696	532 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	VIPR1	P32241	457 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	EPHB1	P54762	984 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	COPS2	P61201	443 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	NIPAL4	Q0D2K0	466 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	ZBTB17	Q13105	803 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	MTM1	Q13496	603 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	ARHGEF7	Q14155	803 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	INPP5A	Q14642	412 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	PPP2R5E	Q16537	467 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	ZNF542P	Q5EBM4	170 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	KDM7A	Q6ZMT4	941 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	MACC1	Q6ZN28	852 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	KANSL1	Q7Z3B3	1105 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	SYCE1	Q8N0S2	351 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	SLC25A45	Q8N413	288 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	ATL2	Q8NHH9	583 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	ARRDC2	Q8TBH0	407 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	TFB1M	Q8WVM0	346 aa	Known RBP	11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	BTN2A2	Q8WVV5	523 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	PIH1D2	Q8WWB5	315 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	IL12RB2	Q99665	862 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	TDRD1	Q9BXT4	1180 aa	Known RBP	11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	OCEL1	Q9H607	264 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	KCTD5	Q9NXV2	234 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	SAE1	Q9UBE0	346 aa	Predicted RBP	11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	PPIL1	Q9Y3C6	166 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	PLXNA2	O75051	1894 aa		11.12	□□□□□ -0.63
GGA1-222	ENST00000489772	MACROD2	A1Z1Q3	448 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms