RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 FAM186AA6NE01 2351 aa7.9□□□□□ -1.15
SSR1-210ENST00000489567 NPIPB15A6NHN6 443 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 GOLGA8CPA6NN73 597 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 CDX4O14627 284 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 FANCGO15287 622 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 KCNN4O15554 427 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 GNSP15586 552 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 ENGP17813 658 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 GM2AP17900 193 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 LHCGRP22888 699 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 XPAP23025 273 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 LIG3P49916 1009 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 AFF3P51826 1226 aaKnown RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 GDF10P55107 478 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 GRIK2Q13002 908 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 SETMARQ53H47 684 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 ARMC12Q5T9G4 340 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 NAPEPLDQ6IQ20 393 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 KIAA1161Q6NSJ0 714 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 DARS2Q6PI48 645 aaKnown RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 LIPIQ6XZB0 460 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 PID1Q7Z2X4 250 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 KDELC2Q7Z4H8 507 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 TSPAN33Q86UF1 283 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 EGFL6Q8IUX8 553 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 PAF1Q8N7H5 531 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 C12orf50Q8NA57 414 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 CEP76Q8TAP6 659 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 CCDC110Q8TBZ0 833 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 C1orf54Q8WWF1 131 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 OXNAD1Q96HP4 312 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 MS4A14Q96JA4 679 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 TRIB3Q96RU7 358 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 TMEM121Q9BTD3 319 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 NUSAP1Q9BXS6 441 aaKnown RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 SLC25A51Q9H1U9 297 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 PCDH9Q9HC56 1237 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 AASDHPPTQ9NRN7 309 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 KLHL8Q9P2G9 620 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 SUSD2Q9UGT4 822 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 PHTF1Q9UMS5 762 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 JRKLQ9Y4A0 524 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 ADAMTS9Q9P2N4 1935 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 GOLGA6L9A6NEM1 432 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 POM121BA6NF01 834 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 ARHGAP33O14559 1287 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 MTSS1O43312 755 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 CEP104O60308 925 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 PMPCBO75439 489 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 C6P13671 934 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 HNRNPA2B1P22626 353 aaKnown RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 CES1P23141 567 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 CD38P28907 300 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 HNF1BP35680 557 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 DPP6P42658 865 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 GRIA4P48058 902 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 SUOXP51687 545 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 POLR2LP62875 67 aaKnown RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 ELP6Q0PNE2 266 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 GALNT3Q14435 633 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 CNGA3Q16281 694 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 PCSK7Q16549 785 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 KIF19Q2TAC6 998 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 AASDHQ4L235 1098 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 ANKRD20A2Q5SQ80 823 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 PRAMEF14Q5SWL7 426 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 ANKRD20A1Q5TYW2 823 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 ANKRD20A3Q5VUR7 823 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 ERAP2Q6P179 960 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 GCNT7Q6ZNI0 430 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 DPPA4Q7L190 304 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 CDKL3Q8IVW4 592 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 FAM71DQ8N9W8 422 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 TTC13Q8NBP0 860 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 CXorf40AQ8TE69 158 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 COG1Q8WTW3 980 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 CENPTQ96BT3 561 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 BMFQ96LC9 184 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 MCCC1Q96RQ3 725 aaPredicted RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 WDR24Q96S15 920 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 EDEM2Q9BV94 578 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 IL21RQ9HBE5 538 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 MBNL1Q9NR56 388 aaKnown RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 GEMIN8Q9NWZ8 242 aaKnown RBP7.89□□□□□ -1.15
SSR1-210ENST00000489567 SMARCAL1Q9NZC9 954 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 DMTF1Q9Y222 760 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 ANKRD6Q9Y2G4 727 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 PPIL1Q9Y3C6 166 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 SNX11Q9Y5W9 270 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 GVINP1Q7Z2Y8 2422 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 TRPM6Q9BX84 2022 aa7.89□□□□□ -1.15
SSR1-210ENST00000489567 ZNF292O60281 2723 aa7.88□□□□□ -1.15
SSR1-210ENST00000489567 PTPRZ1P23471 2315 aaPredicted RBP7.88□□□□□ -1.15
SSR1-210ENST00000489567 PI4KAP42356 2102 aa7.88□□□□□ -1.15
SSR1-210ENST00000489567 LRRK1Q38SD2 2015 aa7.88□□□□□ -1.15
SSR1-210ENST00000489567 A0A0J9YYE9 177 aa7.88□□□□□ -1.15
SSR1-210ENST00000489567 PRR5-ARHGAP8B1AHC4 643 aa7.88□□□□□ -1.15
SSR1-210ENST00000489567 PRAMEF26H0Y7S4 382 aa7.88□□□□□ -1.15
SSR1-210ENST00000489567 VILLO15195 856 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms